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Name : Rcas_2016 (Rcas_2016) Accession : YP_001432122.1 Strain : Roseiflexus castenholzii DSM 13941 Genome accession: NC_009767 Putative virulence/resistance : Virulence Product : ATPase Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 2583779 - 2586322 bp Length : 2544 bp Strand : + Note : PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: rrs:RoseRS_1731 ATPase AAA-2 domain protein DNA sequence : ATGTCCGAGCGGGTATACGATAAGTTTACAAAACGCGCCAAACAGGTGTTGCAAATCGCCACCGAAGAGGCGCGTGCATT CAATCACCCCTACATTGGCACCGAGCACATTCTCCTCGGTCTGATCCGTGAGGGTGAGGGCGTTGCGGCGCGTGTGCTGG ATGAGCTTGGCGTGAAGCTCGCGCAGGCGCGCCATGCCGTTGAGTTCATTGTTGGTCACGGGGAGGGCCCGCCACGGCAG GATCAGGATCTCACCGCGCGCGCCAAGAAGGTGATTGCCTATGCGGTCGAAGAAGCCAAACGCCTGAATCATCACTATAT CGGCACTGAACACCTGCTGCTCGGTCTGGTGCGCAATGGTGAAGGCGTGGCGACCGGCGTTCTCGATATCCTGGGAGTGT CACTCGAGCAGGTGCGCACGAATGTGATGCGCGTGCTGCGTCAGGGGGCCGGCGCGGGTGTCGAGCGTCCCGGGGCTGTG TCGTCGAGTTCATCGCAGTCGTCGCAGCGCCAGAGTAAGACGCCCTATCTCGATGCGCTCGGCACCGACTTGACCGAGAT GGCAGAAGCCGGGCGTCTCGATCCGGTGATCGGTCGCCAGCACGAAATCGAGCGGGTGATTCAGATTCTCAGTCGTCGCA CGAAGAATAATCCGGCGCTGATCGGCGAGCCAGGCGTCGGCAAAACGGCGATTGTCGAAGGATTGGCGCAGCGGATCGTC GCCGGTGAGGTGCCGGACAGCATCAAGGGCAAGCGGGTGGTGACGCTCGATATGGGCGCGCTCGTGGCGGGCACCAAGTA TCGTGGACAGTTCGAGGAGCGCCTGAAGCGCGTCGTCGATGAGATCAAGGAAACCCGCTGCATTCTGTTTATCGATGAGT TCCATACCATTATCGGCGCGGGCGGCGCCGAAGGCACGCTCGACGCTGCCAATATTCTGAAGCCAGCGCTGTCGCGCGGC GAGTTGCAGACGATTGGCGCCACGACGCTCGATGAGTACCGCAAGTATATCGAACGCGACGCGGCGCTCGAACGGCGCTT CCAACCGGTGATGGTCGAGCAGCCGACTGAGGAAGAGACGATCGAGATTCTGCGCGGTATCAAGAGCCGCTACGAGGATT TTCATCAGTTGCAGATCTCCGATGAGGCGATCAAGGCGGCGGCGCACCTCTCGGCGCGTTATGTGCCTGATCGTTTCCTG CCGGATAAAGCGATTGACCTGATCGATGAGGCGGCAGCGCGTGTTCGTATGACACGCTCGGCGACCCCGCCCTCGCTGCG CGATGCATTGCGCGGTCTGGAGGCGATTCGAAAGGAGCGTGAGGCGGCAATCGAGGATGAACAGTTTGAACTTGCCGCCG ACCTTCGCGAGCGTGAAGAGCGCATGATGGCGCGTATCCAGAAGATTGAAGCCGAACTCGGCATTGGCAGCGATGCTCAT CTTATGGAGCGTCCGTATGTCACCGAAGAGGATATTGCCGAAGTCGTCGGGATGTGGACCGGTATTCCGGTCAAACGCCT GAAGGGGGACGAAACGACCCGTCTGCTCCAGATGGAAGAATATCTGCACAGCCGCATCGTCGGGCAGCACGAGGCGATTG TGACCATCGCCAAAGCGGTGCGTCGCGCGCGCGCCGGGCTTAAGGACCCCAAGCGACCAATTGGCTCGTTTATCTTCTGC GGTCCCACCGGCGTCGGCAAGACTGAACTGGCAAAGGCGCTCGCCGAATTCATGTTCGGCTCGGAGGAGCACCTGATCAA GATTGACATGTCTGAGTTCCAGGAGCGCCACACAACTTCGCGCCTGGTCGGTTCGCCGCCGGGCTATGTGGGGTATGGTG AGGGCGGTCAGTTGACCGACGCGGTGCGGCGTAAGCCGTATTCGGTGGTGCTCTTCGATGAGATCGAGAAGGCGCATCCC GATGCCTTCAACCTGCTGCTTCAGGTGTTAGAGGACGGTCACCTGACGGATGGCAAAGGGCGACGGGTCGATTTCCGCAA TACGATTATCATCATGACCTCGAATGTCGGCACCGAGCACATCCGACGCGCATCGCGCATTGGCTTCTCCGGGTATAGCG CGGGCAGCGAACTCGACAACGAGGATATTCGCAAGAAGGTGGACGATGCGCTTAAGCAGTTGTTCCGCCCCGAATTCCTC AACCGCATCGATGCGACGATCATCTTCCATGCGCTGACGAACGAAGAGATCCGGCAGATCACGCGGTTGATGCTCAAGCG GGTGCAGGAGCAACTCAAGGAGCATAACCTGACGCTCGAGATTACCGATGAAGCCTGCGATCTGCTGGCGAAGCGCGGCT ATGATCCGGCATATGGCGCGCGCCCGTTGCGTCGTATCATTACCAACCTGATCGAGGATCCGCTTTCGGAGGGCGTGCTG GAAGGTCGTTTCCGTTCCGGCGATAAGGTGCTCGTCGATGTGGCGACGCTGGACAACGGTGAACAGTACCTCCGCCTGCG CCCGGCGCGTGAAGTTGAGGAGGTGCATGCTGTCGAAACGGAGACGGTCGAGGTCTCTGGTTGA Protein sequence : MSERVYDKFTKRAKQVLQIATEEARAFNHPYIGTEHILLGLIREGEGVAARVLDELGVKLAQARHAVEFIVGHGEGPPRQ DQDLTARAKKVIAYAVEEAKRLNHHYIGTEHLLLGLVRNGEGVATGVLDILGVSLEQVRTNVMRVLRQGAGAGVERPGAV SSSSSQSSQRQSKTPYLDALGTDLTEMAEAGRLDPVIGRQHEIERVIQILSRRTKNNPALIGEPGVGKTAIVEGLAQRIV AGEVPDSIKGKRVVTLDMGALVAGTKYRGQFEERLKRVVDEIKETRCILFIDEFHTIIGAGGAEGTLDAANILKPALSRG ELQTIGATTLDEYRKYIERDAALERRFQPVMVEQPTEEETIEILRGIKSRYEDFHQLQISDEAIKAAAHLSARYVPDRFL PDKAIDLIDEAAARVRMTRSATPPSLRDALRGLEAIRKEREAAIEDEQFELAADLREREERMMARIQKIEAELGIGSDAH LMERPYVTEEDIAEVVGMWTGIPVKRLKGDETTRLLQMEEYLHSRIVGQHEAIVTIAKAVRRARAGLKDPKRPIGSFIFC GPTGVGKTELAKALAEFMFGSEEHLIKIDMSEFQERHTTSRLVGSPPGYVGYGEGGQLTDAVRRKPYSVVLFDEIEKAHP DAFNLLLQVLEDGHLTDGKGRRVDFRNTIIIMTSNVGTEHIRRASRIGFSGYSAGSELDNEDIRKKVDDALKQLFRPEFL NRIDATIIFHALTNEEIRQITRLMLKRVQEQLKEHNLTLEITDEACDLLAKRGYDPAYGARPLRRIITNLIEDPLSEGVL EGRFRSGDKVLVDVATLDNGEQYLRLRPAREVEEVHAVETETVEVSG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 55 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Rcas_2016 | YP_001432122.1 | ATPase | VFG0079 | Protein | 0.0 | 56 |
