Gene Information

Name : Rcas_1692 (Rcas_1692)
Accession : YP_001431802.1
Strain : Roseiflexus castenholzii DSM 13941
Genome accession: NC_009767
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0469
EC number : 2.7.1.40
Position : 2182439 - 2183878 bp
Length : 1440 bp
Strand : +
Note : KEGG: rrs:RoseRS_1428 pyruvate kinase; TIGRFAM: pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta

DNA sequence :
ATGACAGAGCAGGAGCATATGCGCCGCACAAAAATTGTCGCAACGATCGGACCGGTCAGCAGCAGCCCTGAGATGATCGA
GCGATTGCTGACCGCCGGGATGGATGTCGCGCGTCTCAACTTTTCCCACGGAACCCATGAAGAGCATGCTCAACGGATTC
AGGTCTTGCGCGACATTGCAGCGCGCAAGGAGCGCCCCCTGGCGTTGCTCCAGGACCTGCAAGGACCAAAGATTCGCACC
GGACCGCTGGTTGACCGCAAGCCGGTGATGCTGCGCGCCGGTGACCGGTTCACAATCACAACGCGGAACGTACCGGGCAC
AGCGAGTCTGGTCAGCACCACCTACGCCGCCCTGCCGCGCGATGTGCATCCCGGCGATCGGATTCTGATCTCCGACGGAC
TGATCGAAGCGCAGGTCGTGCGCGTTTCGGGCAGTGAGGTTGAGACCGAAATCGTGGTCGGCGGCGAACTGCGCGAAAAC
CAGGGCATCAACCTGCCCGGGGTCGAAGTCAGCGCACCGGCATTAACCGACAAAGACCGCAGCGACCTGCGGTTTGGTCT
GGCGCATGGCGTCGATTACGTTGCGTTGTCATTCGTGCGCCGCGCGTCGGATCTGCTCGAAATCAAGGCGCAGATTACGG
CTGCGGGCGCGTCTACGCCGGTGATTGCAAAGATCGAAAAGCCGGAAGCGCTGCGTGAATTTGAAGCCATTCTGGAAGCG
GCGGACGGAATTATGGTCGCGCGTGGCGATCTGGGGGTCGAAATGCCGCCGGAGCAGGTGCCGATTGTGCAGAAGCAACT
GATCGAAGCGGCGAACATGGCGGGCAAGCCGGTCATTACCGCAACGCAAATGCTCGATTCGATGATCCGCAACCCGCGCC
CGACGCGCGCCGAGGCGAGCGATGTTGCCAATGCGATTATCGATGGGACAGACGCCGTAATGCTGAGCGGCGAAACGGCG
ACCGGCGCCTACCCCGTCGAGGCGGTGCGCATGATGGCGCGCATCGCGGATGTCACGGAAGCCAGCGGACGGCGCGGTGA
CCATAGTCACGAGTCCATCTGGCGCTTCCACGAGCAGCCGACCGTCGCAGCCGCGATCAGTGCTGCGGTGCATGCGATTG
TTCAGACCTTGCCGGTAACCTCAATTGTGGCATTCACTATGAGCGGCAATACTGCCCGTCTGATAGCGCGACAGCGACCA
AAGACGCCGATCTTCGCGTTCACTCCCTCAGAAGTGGTTTGCCGACGTTTGAACCTGATCTGGGGCGTGACGCCTATTCT
CAGCCCCTATGTGGATCGGCTCGATGATCTGGAGAATGCAGTACGCAGCACACTGCTGGGGCTGGGGTACGCGCGACCCG
GTGATCAGATTGCGATAACCGGTGGGCACCCGATTGCTGCGCGCGGCACGACGAACTTTGTGAAGGTGACACGGTTGTGA

Protein sequence :
MTEQEHMRRTKIVATIGPVSSSPEMIERLLTAGMDVARLNFSHGTHEEHAQRIQVLRDIAARKERPLALLQDLQGPKIRT
GPLVDRKPVMLRAGDRFTITTRNVPGTASLVSTTYAALPRDVHPGDRILISDGLIEAQVVRVSGSEVETEIVVGGELREN
QGINLPGVEVSAPALTDKDRSDLRFGLAHGVDYVALSFVRRASDLLEIKAQITAAGASTPVIAKIEKPEALREFEAILEA
ADGIMVARGDLGVEMPPEQVPIVQKQLIEAANMAGKPVITATQMLDSMIRNPRPTRAEASDVANAIIDGTDAVMLSGETA
TGAYPVEAVRMMARIADVTEASGRRGDHSHESIWRFHEQPTVAAAISAAVHAIVQTLPVTSIVAFTMSGNTARLIARQRP
KTPIFAFTPSEVVCRRLNLIWGVTPILSPYVDRLDDLENAVRSTLLGLGYARPGDQIAITGGHPIAARGTTNFVKVTRL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 6e-89 46
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 4e-89 46
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 4e-89 46
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 8e-89 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rcas_1692 YP_001431802.1 pyruvate kinase VFG0479 Protein 2e-89 46