Gene Information

Name : Rcas_1513 (Rcas_1513)
Accession : YP_001431624.1
Strain : Roseiflexus castenholzii DSM 13941
Genome accession: NC_009767
Putative virulence/resistance : Virulence
Product : ribonuclease III
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0463
EC number : 3.1.26.3
Position : 1934377 - 1935369 bp
Length : 993 bp
Strand : +
Note : PFAM: glycosyl transferase family 2; KEGG: rrs:RoseRS_3414 ribonuclease III

DNA sequence : 
ATGACCTTCGTTGAATCTGTGGCGCAGGCGCATCCCCGTGACCAGCGCACGATTGATGCGGAGCAACCCACCTTTTCGAT
TGTAGCGCCGGTATATAACGAAGAGGTGTTATTGCCGGAGTTTTACCGGCGTGTTGTGGCAGCGATCGAGCCGCTGGGTG
AGCCGTTCGAGATTGTGTTGGTGAACGATGGATCGCGCGATCGCTCGCTCCAGATCATGCTGGAACTGCACGAACGCGAT
CCGCGCGTCAAAGTGATCAACTTTTCACGCAACTTCGGGCATCAGATTGCGATCACTGCCGGTACCGACTACGCGCGCGG
CAGGGCAGTCGCTGTGATCGACTCGGACCTTCAAGATCCGCCGGAAGTGATCGTGGACATGATCGCCCGCTGGCGCGAAG
GGTACCAACTCGTTTATGGCGTGCGATCCGAACGTGAAGGCGAAACGGCTTTCAAACTTGCCACTGCTTCCCTCTTCTAC
CGCCTCATTCGCAAAATTACCAGCGTCGATATTCCTGCCGACACCGGCGACTTCCGCTTGATGGATCGCAAGGTGGTCGA
TGCGCTCAAGTCGATGCGTGAGCATCACCGCTTCATGCGCGGGTTGTCGGTGTGGGTCGGCTTCAAGCAGACTGGCGTCA
CCTACAAGCGCGACGCGCGCAAGGCGGGGGTGACGAAATATCCGCTGCGCAAAATGCTGAAGTTTGCGATGGACGGTATT
ACCGCATTCTCGTACCTGCCGCTGCAACTGGCAACCTATGTGGGGTTCGGCGTGGCGGCGCTCGGGTTGCTCGGCATTAT
TGCGGTGATCATTCTGCGTCTGCTCGGCAATGAGCTTCTGGGGCAGGCGACGACGCTGGTGGCGGTGCTGTTCATGGGGG
GCGTGCAGCTGGTCTTCCTCGGCATCCTCGGCGAATACCTGGGTCGCATTTACGATGAAGTCAAGCAGCGCCCCCTCTAT
ATCGTCGCCGATGCGATCGGGTTCGATGAATAA

Protein sequence : 
MTFVESVAQAHPRDQRTIDAEQPTFSIVAPVYNEEVLLPEFYRRVVAAIEPLGEPFEIVLVNDGSRDRSLQIMLELHERD
PRVKVINFSRNFGHQIAITAGTDYARGRAVAVIDSDLQDPPEVIVDMIARWREGYQLVYGVRSEREGETAFKLATASLFY
RLIRKITSVDIPADTGDFRLMDRKVVDALKSMREHHRFMRGLSVWVGFKQTGVTYKRDARKAGVTKYPLRKMLKFAMDGI
TAFSYLPLQLATYVGFGVAALGLLGIIAVIILRLLGNELLGQATTLVAVLFMGGVQLVFLGILGEYLGRIYDEVKQRPLY
IVADAIGFDE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gtrBI AAF09026.1 GtrBI Not tested SHI-O Protein 2e-48 44
ESA_03027 YP_001439092.1 hypothetical protein Not tested Not named Protein 2e-49 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rcas_1513 YP_001431624.1 ribonuclease III VFG0670 Protein 1e-49 45