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Name : Rcas_1253 (Rcas_1253) Accession : YP_001431368.1 Strain : Roseiflexus castenholzii DSM 13941 Genome accession: NC_009767 Putative virulence/resistance : Unknown Product : 2-deoxy-D-gluconate 3-dehydrogenase Function : - COG functional category : I : Lipid transport and metabolism COG ID : COG1028 EC number : - Position : 1621032 - 1621799 bp Length : 768 bp Strand : - Note : TIGRFAM: 2-deoxy-D-gluconate 3-dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rrs:RoseRS_0498 2-deoxy-D-gluconate 3-dehydrogenase DNA sequence : ATGAGCAGCGCGCTCGATCTTTTTCGTCTCGACGGTCGCGTGGCATTGGTCACCGGCGGCGATAAGGGGTTGGGGCAGGG AATTGCCATCGCACTCGCGCAGGCTGGCGCAGACGTGGCGGTTGTCTCGCGTTTGGGGAATGCTGTCGCTACCCTCGATG CCATCGCCGCAACCGGACGACGCAGCGTTGCACTGACCGCCGATCTGAGCAGCACGGCGCCGGTCGAGGGGGTGGTGAGC GAAACCATCACGCGCCTTGGACGGCTCGATATTCTCGTTAACAATGCCGGGATTATCCGGCGCGCCCCGGCTGTTGATTA TGGATGGAACGATTGGCGCGCGGTGCTCGACGTGAACCTCGATGCAGTATGGGCGCTCTGCCAGGCGGCTGGTCGTCCAA TGATCGCCCAGGGTCACGGAAAGATCATCAATGTCGCATCCCTGCTCGCTTTCCAGGGAGGCATTCGCGTGCCCGCCTAC GCCGCTGCCAAGCACGCCGTCGCCGGCCTGACAAAGGCGCTTGCCAATGAGTGGGCGCATCTGGGGGTGAATGTCAATGC CATTGCCCCGGGCTACATGGTCACCGACAACACACAGGCGCTGCGCGATGATCCTGAACGATCCCGTCAGATTCTCGAAC GCATTCCCGCCGGGCGCTGGGGCGTTCCCGCCGATCTGGCAGGGGCGGCAATCTTTCTGGCGTCATCCGCCAGCGACTAC GTGCATGGGCACGTACTCGTCGTCGATGGCGGGTGGCTGGCGCGGTGA Protein sequence : MSSALDLFRLDGRVALVTGGDKGLGQGIAIALAQAGADVAVVSRLGNAVATLDAIAATGRRSVALTADLSSTAPVEGVVS ETITRLGRLDILVNNAGIIRRAPAVDYGWNDWRAVLDVNLDAVWALCQAAGRPMIAQGHGKIINVASLLAFQGGIRVPAY AAAKHAVAGLTKALANEWAHLGVNVNAIAPGYMVTDNTQALRDDPERSRQILERIPAGRWGVPADLAGAAIFLASSASDY VHGHVLVVDGGWLAR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAK01499.1 | 2-deoxy-D-gluconate 3-dehydrogenase | Not tested | PAGI-1 | Protein | 3e-19 | 43 |
| unnamed | AAT96115.1 | putative short-chain type regulator | Not tested | T-PAI | Protein | 1e-20 | 42 |
