Gene Information

Name : Rcas_1036 (Rcas_1036)
Accession : YP_001431158.1
Strain : Roseiflexus castenholzii DSM 13941
Genome accession: NC_009767
Putative virulence/resistance : Virulence
Product : redoxin domain-containing protein
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG2077
EC number : -
Position : 1353514 - 1354020 bp
Length : 507 bp
Strand : -
Note : PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: rrs:RoseRS_0408 redoxin domain protein

DNA sequence :
ATGGAACGACCAAACGCTTTCGATTTCTGGGGTCCCAAAACGCTGATCGGTCCTGAGTTGAAGCCGGGCGATCCGGCGCC
GGCGTTCACGTTGACGACCGGCAAAGACACGATCAGCAGCCAACAGTTCGCCGGTAAGCCGCTGGTGATCAGCGTCATTC
CGTCGATCGACACCGGTGTGTGCTCCAAACAGACCCGTCGCTTCAATCAGGAAGCGGCGGCGCTCGGCGATGCAGTCAAT
ATCCTGACCGTCAGCGCCGATCTGCCGTTTGCGCAGGGGCGCTGGTGCGGCGCCGAAGGGGTGGATAAGGTCGTTATGGC
GTCGGATCACCTCGATATGAGTTTCGGCGCAGCGTATGGCACCTATGTCAAAGAGTTGCGCATCGAAAGCCGGGCCGTCT
TTGTGGTGGATAAGGACGGCATCATCCGCCACGTTGAGTACGTACCGGTCGCTGGTCACGAACCGAACTACGACGCGGCA
CTGGCGGCGCTGAAGGAACTCCTGTAA

Protein sequence :
MERPNAFDFWGPKTLIGPELKPGDPAPAFTLTTGKDTISSQQFAGKPLVISVIPSIDTGVCSKQTRRFNQEAAALGDAVN
ILTVSADLPFAQGRWCGAEGVDKVVMASDHLDMSFGAAYGTYVKELRIESRAVFVVDKDGIIRHVEYVPVAGHEPNYDAA
LAALKELL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tpx NP_230472.1 thiol peroxidase Virulence VPI-1 Protein 2e-18 41
tagD AAK20781.1 toxR-activated gene D protein Virulence VPI Protein 2e-18 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rcas_1036 YP_001431158.1 redoxin domain-containing protein VFG0087 Protein 6e-19 41