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Name : pilB (CBUD_1951) Accession : YP_001425261.1 Strain : Coxiella burnetii Dugway 5J108-111 Genome accession: NC_009727 Putative virulence/resistance : Virulence Product : type 4 pili biogenesis protein (nuleotide-binding protein) Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 1932415 - 1933968 bp Length : 1554 bp Strand : + Note : - DNA sequence : ATGCAAACTAAGGTCGAGGGCCTCGCTCATATTTTATTGCAGACAAATGCGTTAACTAACAGCCAAATTGCCCGTGCTAT TGAACAGGCGGCGGGAGCACAATCACCGTTGCTGCATTATTTAGTTACCGAGAAAATAGTATCCTCAGAAAAAATAGCAG AAGCCTGCGCCACTTACTTTGGTTTAGAAGCGATTAACTTGCAGACTCAACCACTGAACCCATCGCTTTGTCATGAAATA CCACGGAAATATTTAATGCGCTATGCGTTCATTCCACTTGCAGTAAAATCACCTACGCTAGCTATTAGCGATCCGCTATA TTTTCCCTTAATCGAAGAGCTCCAGTTTCAGACTAATAAACAATACAAAATTGTTTTTGCTCCCTATAAATCATTTGCTG CGTTAATAAATAATTTTGTGAGTCGTCAAATTTACGAGACAGTTTCACAAGGTAAAGCTTCCATTGTTGAGTTAGTAAAT CAAGTGCTCACGGATGCCATCTATCGAGAAGCGTCAGATGTTCACTTTGAACCGATGCAACAACATTACCGAATTCGGAT GCGTATCGATGGGATTTTACATACTACTACTCTCTTGCCAAATACACAGTCGCCAGCAATGAGTAGCCGGTTAAAAGTAC TGGCTGAATTAGATATTTCTGAAAAACGCTTGCCGCAGGATGGGCGCTTTTATTTTACAACGCTTACCCATCTTAAACGT GACTGCCGACTTAGTAGCTGCCCGACTTTATTCGGGGAAAAAATCGTCATCCGTTTACTAAACCCCGTTCATCATTTATT AAAATTTGAAGAGTTGGGTTTAGAAGAAAAACCGAAGCAACTCATCATGAAAAAAATCAAACAACCCCAAGGTTTGATTC TTGTCACAGGACCCACGAGAAGCGGGAAAACGGTTTCACTGTATGCCGCGCTTAATCAGATTAATTCAACTCAAAAAAAT ATCTCCACCGTAGAAGATCCCATTGAAATACAATTAGCCGGGGTTACCCAAGTTAATATTCGCCCAAAAGCCGGACTTAA TTTCGCCGCTGTATTACGCGCTTTTTTGCGCCAAGATCCTGATGTTATCATGGTGGGGGAAATTCGCGATTTTGAAACTG CTTCCATTGCTGTTCGCGCTGCACATACCGGGCATTTAGTCTTATCCACCTTACATACCAATAGCGCCGTCGAATGCATT ACACGATTAATCGATATGGGGATCGAGCCATTCAACCTTGCTAGCGTATTAAAGCTCGTGGTTGCTCAGCGACTCGTCAG ACAGCTTTGCGCTCATTGCCAAGCAACGAAGATTTCCTGCCCCTTTTGTTTAAACGGATACCAGGGGCGTACGGGAATCT ATGAAGTTCTGCCTATTACTCCTTCCATTATCGAACTTATTTTACAAAAACGATCCGCGCAAGAAATTAATGCCTGCGCC ATACAAGAGGGCATGCAAACTTTGTGGCAAGCAGCTTTGAATAAAGCAAAGACGGGTATTACAAACCTCAACGAAATTTA CCGCGTGATTCAATCTGAAAATAACTATGCTTAA Protein sequence : MQTKVEGLAHILLQTNALTNSQIARAIEQAAGAQSPLLHYLVTEKIVSSEKIAEACATYFGLEAINLQTQPLNPSLCHEI PRKYLMRYAFIPLAVKSPTLAISDPLYFPLIEELQFQTNKQYKIVFAPYKSFAALINNFVSRQIYETVSQGKASIVELVN QVLTDAIYREASDVHFEPMQQHYRIRMRIDGILHTTTLLPNTQSPAMSSRLKVLAELDISEKRLPQDGRFYFTTLTHLKR DCRLSSCPTLFGEKIVIRLLNPVHHLLKFEELGLEEKPKQLIMKKIKQPQGLILVTGPTRSGKTVSLYAALNQINSTQKN ISTVEDPIEIQLAGVTQVNIRPKAGLNFAAVLRAFLRQDPDVIMVGEIRDFETASIAVRAAHTGHLVLSTLHTNSAVECI TRLIDMGIEPFNLASVLKLVVAQRLVRQLCAHCQATKISCPFCLNGYQGRTGIYEVLPITPSIIELILQKRSAQEINACA IQEGMQTLWQAALNKAKTGITNLNEIYRVIQSENNYA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 5e-61 | 43 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 4e-61 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| pilB | YP_001425261.1 | type 4 pili biogenesis protein (nuleotide-binding protein) | VFG2426 | Protein | 1e-69 | 45 |
| pilB | YP_001425261.1 | type 4 pili biogenesis protein (nuleotide-binding protein) | VFG0182 | Protein | 4e-62 | 44 |
| pilB | YP_001425261.1 | type 4 pili biogenesis protein (nuleotide-binding protein) | VFG0233 | Protein | 2e-68 | 44 |
| pilB | YP_001425261.1 | type 4 pili biogenesis protein (nuleotide-binding protein) | VFG2048 | Protein | 4e-62 | 43 |
| pilB | YP_001425261.1 | type 4 pili biogenesis protein (nuleotide-binding protein) | VFG1876 | Protein | 9e-63 | 42 |
| pilB | YP_001425261.1 | type 4 pili biogenesis protein (nuleotide-binding protein) | VFG0112 | Protein | 8e-83 | 41 |
| pilB | YP_001425261.1 | type 4 pili biogenesis protein (nuleotide-binding protein) | VFG1880 | Protein | 2e-89 | 41 |
