Gene Information

Name : rph (CBUD_1782)
Accession : YP_001425114.2
Strain : Coxiella burnetii Dugway 5J108-111
Genome accession: NC_009727
Putative virulence/resistance : Unknown
Product : ribonuclease PH
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0689
EC number : 2.7.7.56
Position : 1778145 - 1778864 bp
Length : 720 bp
Strand : +
Note : RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs

DNA sequence :
GTGATCATGCGTCCTAGCAAACGAGCAGCGAATGAATTACGGCCACTGAGTTTTACTACTCAATTTACTCGTTATGCAGA
AGGGTCGGTATTAGTCACGTTGGGAAACACTAAAGTCATTTGCAATGCAAGTATTGTTGAAGGTGTGCCGCGGTTTCTTA
AAAATAGTGAACAAGGCTGGTTAACAGCGGAATACGGCATGTTACCCCGCTCCACTCACAGCCGCATGGACCGAGAAGCC
TCTCGCGGTAAACAAGGCGGTCGAACGGTGGAAATTCAACGCTTAATTGGCCGGTCGCTACGAGCCGCCTTAGATTTAAA
GCTGCTTGGGCCTTATACTATTACTATTGACTGCGATGTCATCCAAGCGGACGGAGGAACGCGCACCGCTGCCATTAATG
GCAGTTGTATTGCCATGATCGAAGCGTTGCGCCACTTGCAACGTAAAGGAATTTTACAAACTGATCCGCTTAAACATAAA
GTCGCTGCTGTTTCTGTGGGTATTTACAAGGGTGTCCCCGTACTTGATTTGGATTATGCAGAAGACTCCAACGCGCATAC
GGATATGAACGTAGTGATGACAGACAATGATGCTTTTATTGAAATCCAAGGCACGGCCGAAGGGGATGCTTTTCATGCCA
AAGAACTGGATGCACTGATTAATCTTGCACGGCATGGCATCAAACAGATTATCGAAAAACAACAGGAAGCGTTAAGTTAA

Protein sequence :
MIMRPSKRAANELRPLSFTTQFTRYAEGSVLVTLGNTKVICNASIVEGVPRFLKNSEQGWLTAEYGMLPRSTHSRMDREA
SRGKQGGRTVEIQRLIGRSLRAALDLKLLGPYTITIDCDVIQADGGTRTAAINGSCIAMIEALRHLQRKGILQTDPLKHK
VAAVSVGIYKGVPVLDLDYAEDSNAHTDMNVVMTDNDAFIEIQGTAEGDAFHAKELDALINLARHGIKQIIEKQQEALS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 3e-61 56