Gene Information

Name : treA (RBAM_007980)
Accession : YP_001420413.1
Strain : Bacillus amyloliquefaciens FZB42
Genome accession: NC_009725
Putative virulence/resistance : Unknown
Product : TreA
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0366
EC number : 3.2.1.93
Position : 786650 - 788335 bp
Length : 1686 bp
Strand : +
Note : trehalose-6-phosphate hydrolase TreA

DNA sequence :
ATGAAAACAGACAGCACACCATGGTGGAAAAAGGCAGCGGTATATCAAATTTATCCGAAGAGCTTTAATGATACGACGGG
AAACGGGATCGGTGATCTGAACGGTATTATCGAGAAGCTTGATTATTTGCAGAAGCTTTTAATTGATGTCATTTGGCTTA
CGCCGATTTACGATTCGCCGCAGAATGACAACGGTTATGACATTCGCGATTATTGCACTATTTATGAAGAATACGGAACG
ATGGAGGATTTTGAACGCCTTATCGATGAAGCGCACAAAAGAGGAATCAAGGTCGTCATGGATCTTGTCGTCAACCATAC
ATCAGTCGAGCATCAATGGTTCAAAGAAGCGGTCTCGTCACCCGACAGTCCGTATCGGGATTTTTACATTTGGAAAGACG
GAAAGGAAGACGGCCGGGCGCCGAACAACTGGGAATCAAAATTCGGCGGTTCCGCTTGGGAGCTCGACCCGGCGTCAGGC
CAGCACTATCTGCATTTATTTGATGTGTCGCAGGCCGATTTGAACTGGGAAAATGAAGAGATGAGAAAACAGGTTTACGA
CATGATGCATTTTTGGTTCCGGAAAGGGATCGACGGCTTCCGGCTGGATGTGATCAACCTCATTTCTAAAGACCAATCGT
TTCCTGATGCCGAGGATGGGCGTGACGGGCGCCCTTATTATACGGACGGGCCGCGCGTGCACGAATTTCTCCATGAGATG
AACCGGGAAGTGTTTTCGAAATATGACAGCATGACGGTCGGTGAAATGTCCTCGACAACGGCTGACCACTGCATCCGGTA
CACAAACCCTGAGAATAAAGAACTCGATATGACTTTTAACTTTCACCATTTAAAAGTGGATTATCCGAATGGTGAAAAAT
GGGCGCTCGCTCCGTTTGATTTTCTGAAGCTGAAACGGATTTTAGCGTTTTGGCAGACGGAGATGCAAAAAGGCGGAGGC
TGGAACGCATTATTCTGGTGCAACCATGACCAGCCGCGGGCCGTATCCAGATACGGAGACGACGGCGTATACCGGACGAA
ATCAGCCAAAATGCTGGCGGCGGCCATTCATATGATGCAGGGCACGCCTTACATTTATCAAGGTGAAGAGATCGGCATGG
GCAATCCGAAATTCGATGACATCGGCTCATACCGCGATGTCGAATCATTGAACATTTACAAAAAGATGAAGGAAGAAGGC
GTGCCCGAAAAAGACATTATCGCCATTTTAAAAGAGAAATCAAGAGACAATGCAAGAACCCCCATTCAGTGGAACAGCGG
GCCGCACGGCGGTTTCACGACGGGCACGCCTTGGATTCCGGCGGCAGATGATTATCGGGACGTTAACGCGGAAGCGGCTT
TGCGGGACCCGGATTCAATTTTCTATCATTATCAGAAGCTCATCAAGCTCAGAAAGGAATATAACATCGTGACTGAAGGA
ACGTTTGAGCTGCTTGCTGAAGACGATCCGGCGGTTCTGGCGTACGTCAGACACGGCAAGGATGAAAAACTGCTGTGCAT
CAACAACTTCTACGGGAAAGAAGCGGACTTTACGGTTCCGCTTAAAGACACGGACGGCTGGCGGTTTACGGTGCTGCTGA
CGAATGATGAACCGAGGGAAGGGCGGCCGGAACGATTGACGCTCCGTCCGTATGAATCGATCGTTTATCATCTGACAAAA
GCGTGA

Protein sequence :
MKTDSTPWWKKAAVYQIYPKSFNDTTGNGIGDLNGIIEKLDYLQKLLIDVIWLTPIYDSPQNDNGYDIRDYCTIYEEYGT
MEDFERLIDEAHKRGIKVVMDLVVNHTSVEHQWFKEAVSSPDSPYRDFYIWKDGKEDGRAPNNWESKFGGSAWELDPASG
QHYLHLFDVSQADLNWENEEMRKQVYDMMHFWFRKGIDGFRLDVINLISKDQSFPDAEDGRDGRPYYTDGPRVHEFLHEM
NREVFSKYDSMTVGEMSSTTADHCIRYTNPENKELDMTFNFHHLKVDYPNGEKWALAPFDFLKLKRILAFWQTEMQKGGG
WNALFWCNHDQPRAVSRYGDDGVYRTKSAKMLAAAIHMMQGTPYIYQGEEIGMGNPKFDDIGSYRDVESLNIYKKMKEEG
VPEKDIIAILKEKSRDNARTPIQWNSGPHGGFTTGTPWIPAADDYRDVNAEAALRDPDSIFYHYQKLIKLRKEYNIVTEG
TFELLAEDDPAVLAYVRHGKDEKLLCINNFYGKEADFTVPLKDTDGWRFTVLLTNDEPREGRPERLTLRPYESIVYHLTK
A

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
malL YP_251987.1 oligosaccharide alpha-1,6-glucosidase Not tested SCCmec Protein 1e-136 49