Gene Information

Name : yrkD (RBAM_005420)
Accession : YP_001420165.1
Strain : Bacillus amyloliquefaciens FZB42
Genome accession: NC_009725
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG1937
EC number : -
Position : 523350 - 523610 bp
Length : 261 bp
Strand : +
Note : conserved hypothetical protein YrkD

DNA sequence :

ATGGAATATGATCAAAAGATTAAAAATCGCTTACGTCGGATAGAAGGACAGATAAAAGGTGTATTGACCATGATGGAACA
AGGAAAAGATTGCAGAGAGGTTGTGACCCAACTAGCTGCTTCACGTAATGCGATCGATCGAGCAATGGGTTTGATTGTGA
GCACAAACCTTGAACATTGTGTTCGTGAAAGTTTAGAAAAGGGAGAAGACACACAACACTTAGTAAAAGAAGCGGTCGAC
TTATTGGTAAAGAGCCGATAA

Protein sequence :

MEYDQKIKNRLRRIEGQIKGVLTMMEQGKDCREVVTQLAASRNAIDRAMGLIVSTNLEHCVRESLEKGEDTQHLVKEAVD
LLVKSR

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
unnamed	BAB83476.1	-	Not tested	SCC 12263	Protein	1e-18	54
SACOL0048	YP_184958.1	hypothetical protein	Not tested	Type-I SCCmec	Protein	4e-21	53
unnamed	BAC57484.1	hypothetical protein	Not tested	Type-IIIinv SCCmec	Protein	6e-21	53
SAV0048	NP_370572.1	hypothetical protein	Not tested	Type-II SCCmec	Protein	9e-21	53
SA0045	NP_373285.1	hypothetical protein	Not tested	Type-II SCCmec	Protein	9e-21	53
unnamed	BAA82210.2	-	Not tested	Type-II SCCmec	Protein	6e-21	53
SERP2514	YP_190056.1	hypothetical protein	Not tested	Type-II SCCmec	Protein	9e-21	53
SAPIG0063	YP_005732873.1	conserved protein YrkD	Not tested	Type-V SCCmec	Protein	5e-21	53
unnamed	BAB47614.1	hypothetical protein	Not tested	Type-III SCCmec	Protein	6e-21	53
SAR0047	YP_039520.1	hypothetical protein	Not tested	Type-II SCCmec	Protein	9e-21	53
unnamed	BAA94324.1	hypothetical protein	Not tested	Type-I SCCmec	Protein	1e-18	53
unnamed	BAA82170.2	-	Not tested	Type-II SCCmec	Protein	6e-21	50
unnamed	BAA86632.1	hypothetical protein	Not tested	Type-I SCCmec	Protein	2e-21	50