|
Name : epsC (RBAM_031650) Accession : YP_001422727.1 Strain : Bacillus amyloliquefaciens FZB42 Genome accession: NC_009725 Putative virulence/resistance : Virulence Product : hypothetical protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1086 EC number : - Position : 3283894 - 3285687 bp Length : 1794 bp Strand : - Note : capsular polysaccharide biosynthesis protein DNA sequence : ATGATTTTTGCATTGGATACGTATCTCGTTTTACTTTCCGTTGTTATAGGATATCAATTTTTTGAGGATTCTTATCACTT TTATGACTCCGGAGCGTTGCTGCTGACTGCCGTGAGCATGCTGATCAGCCATCATGTATGCGCTTTTATGTTTCACCAGT ATAAGCAGGTATGGACGTACACGGGAATAGGAGAGCTGCTTGATCTGCTGAAGGGGATCACGCTGTCCGCAGCTGTGACA GCCGCCGTCCAATACGGGGTGTTCCACACGATTTTGTTCCGGCTGTTGGCCGTCAGCTGGATGGTTCAGCTATTGTTCAT CGGAGGAAGCCGGATGATTTCACGGGTGCTGAAAGAAACGATCGGCAGGAAGCAAAATGACTCTTCCAGGGCGCTGATCA TCGGCGCAGGTGCGGGGGGGACGCTGCTCGTCCGTCAGCTTACCCAGAAAAACGATCTCGGAATCATGCCTGTGGCTTTT ATTGATGATGATCAGACGAAGCATAAGCTCGAAATCATGGGCCTGCCCGTCATCGGCGGAAAAGAAAGCATTATGCCGGC AGTGCAGAGGCTGAGAATTCACCATATTATCATTGCCATTCCGTCTCTTTGCACCCATGAGCTTCAGACGTTATACAAAG AATGTGTGCAGACGGGCGCCCATATTAAAATCATGCCGCAATTTGATGAGATCCTGCTCGGAACGCAGGCTGCCGGACAC ATCAGAGATGTAAAAGCCGAAGATCTGCTCGGCAGAAAGCCGGTCACCCTTGATACGAGCAAAATTTCTGACAGCATCAA GGGAAAAACGATTCTGGTCACGGGCGCCGGCGGCTCAATCGGTTCTGAGATCTGCCGCCAGATCAGCGCGTTTCTTCCGC GGGAAATCGTCCTTCTCGGCCACGGGGAGAACAGCATTCATTCTGTACATACCGAGCTGTCCGCACGCTTCGGCAAAGAG GTGCTCTTTCACGCGGAGATCGCCGATATTCAGGACAGAGATAAAATCTTTACTTTGATGAAAAAATACGAGCCGCACGT CGTCTATCATGCGGCTGCCCATAAACATGTGCCATTAATGGAACATAATCCGGAAGAAGCCGTTAAAAACAACATTATCG GCACGAAAAATGTCGCCGAAGCCGCCGACATGTGCGGAACGGAAACATTCGTGCTGATTTCTTCTGACAAAGCGGTCAAT CCGGCCAATGTCATGGGCGCGACGAAACGGTTTGCGGAAATGGTCATCATGAACCTCGGAAAGGTCAGCCGCACCAAATT CGCCGCCGTCCGTTTCGGAAATGTGCTCGGAAGCCGCGGCAGCGTCATTCCGATTTTCAAAAAGCAGATTGAAAAAGGCG GACCCGTCACCGTCACGCACCCGGCGATGACAAGATATTTTATGACGATTCCCGAAGCGTCAAGACTCGTCATTCAGGCG GGGGCGCTTGCAAAAGGGCGGCAGATTTTCGTTCTGGATATGGGAGAACCCGTCAAAATCGTCGATCTGGCCAAAAACCT GATTCATTTATCAGGCTATACGACAGAACAGATTCCCATCGAATTCTCCGGCATCCGCCCGGGAGAAAAGATGTATGAAG AATTGCTGAATCATAATGAAGTACATACGGAGCAGATTTTTCCGAAAATCCATATCGGGAAAGCGGTGGACGGGAATTGG GCCGTGCTCATCCGTTTTATGGAGGAATTCAGCCGTCTGCCTGAAGAAGAGCTGAGAAAAAGGCTGTTTGAGGCAATCGA ATCAGTACATGAAGAAGCGGCCGCAGGCGTGTGA Protein sequence : MIFALDTYLVLLSVVIGYQFFEDSYHFYDSGALLLTAVSMLISHHVCAFMFHQYKQVWTYTGIGELLDLLKGITLSAAVT AAVQYGVFHTILFRLLAVSWMVQLLFIGGSRMISRVLKETIGRKQNDSSRALIIGAGAGGTLLVRQLTQKNDLGIMPVAF IDDDQTKHKLEIMGLPVIGGKESIMPAVQRLRIHHIIIAIPSLCTHELQTLYKECVQTGAHIKIMPQFDEILLGTQAAGH IRDVKAEDLLGRKPVTLDTSKISDSIKGKTILVTGAGGSIGSEICRQISAFLPREIVLLGHGENSIHSVHTELSARFGKE VLFHAEIADIQDRDKIFTLMKKYEPHVVYHAAAHKHVPLMEHNPEEAVKNNIIGTKNVAEAADMCGTETFVLISSDKAVN PANVMGATKRFAEMVIMNLGKVSRTKFAAVRFGNVLGSRGSVIPIFKKQIEKGGPVTVTHPAMTRYFMTIPEASRLVIQA GALAKGRQIFVLDMGEPVKIVDLAKNLIHLSGYTTEQIPIEFSGIRPGEKMYEELLNHNEVHTEQIFPKIHIGKAVDGNW AVLIRFMEEFSRLPEEELRKRLFEAIESVHEEAAAGV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 2e-117 | 54 |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 6e-115 | 51 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| epsC | YP_001422727.1 | hypothetical protein | VFG1300 | Protein | 2e-121 | 52 |
