Gene Information

Name : spaF (RBAM_031010)
Accession : YP_001422663.1
Strain : Bacillus amyloliquefaciens FZB42
Genome accession: NC_009725
Putative virulence/resistance : Virulence
Product : SpaF
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1131
EC number : -
Position : 3213999 - 3214712 bp
Length : 714 bp
Strand : -
Note : lantibiotic transporter (ATP-binding protein) SpaF

DNA sequence :
ATGAGCAACATCTTAGAAACGAGACAGCTGCAAAAATCATTCGGCAGACAACAGGCAGTGGCTGATGTGTCTCTATCGGT
TAAGCGCAACAGTATATACGGCCTGCTCGGTCCGAACGGCGCCGGAAAATCAACGACTCTTAAAATATTGACCGGAATCT
TGCAGCAAACATCTGGCGAGGTTCTGTTCGACGGACATACATGGAAGCGCGAAGACTTGAAAAGCATCGGTTCCCTGATT
GAAGCGCCGCCGCTTTACAGCAACCTGACAGCTGCTGAAAATCTGAAAGTCCGCTGCGTGATGCTCGGGCTGCCTGATTC
AAGAATTGCGGAAGTGCTGGAAATCACGGGATTAACGGGAACCGGAAAAAAGCGCGCCGGACAATTTTCTATGGGAATGA
AGCAGCGTCTCGGCATTGCGTTAGCATTATTAAACCGTCCGTCGCTCTTAATTCTTGATGAGCCGACAAACGGATTGGAC
CCGATGGGAATTCAGGATTTGCGGGAATTTATCCGCTCCCTGCCCGGACAGGGAATGACGGTTATTTTATCTAGCCACCT
GTTATCAGAAGTCGAGCAGATCGCAGACCATATCGGAATCATCAGTGACGGCGTTTTAGGATATCAGGGAGAAATCAGCC
GGGAAGACGATCTGGAGCGGCTGTTTCTGGAGGTAGTCAAATCAACACGGGAGAAAGCGGGGACAGGAAAATGA

Protein sequence :
MSNILETRQLQKSFGRQQAVADVSLSVKRNSIYGLLGPNGAGKSTTLKILTGILQQTSGEVLFDGHTWKREDLKSIGSLI
EAPPLYSNLTAAENLKVRCVMLGLPDSRIAEVLEITGLTGTGKKRAGQFSMGMKQRLGIALALLNRPSLLILDEPTNGLD
PMGIQDLREFIRSLPGQGMTVILSSHLLSEVEQIADHIGIISDGVLGYQGEISREDDLERLFLEVVKSTREKAGTGK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cdd4 CAA63569.1 - Not tested PaLoc Protein 5e-46 50
sboF YP_006309913.1 SboF Not tested FWisland_1 Protein 6e-44 49
epiF YP_186701.1 epidermin immunity protein F Virulence vSa¥â Protein 2e-44 48
bsaF NP_646577.1 hypothetical protein Not tested vSa¥â Protein 2e-44 48
epiF YP_494453.1 lantibiotic epidermin immunity protein F Not tested vSa¥â Protein 2e-44 48
bsaF YP_001332745.1 lantibiotic immunity protein F Not tested vSa¥â Protein 1e-44 48
Spaf_1123 YP_006309925.1 putative transport ATP-binding protein Not tested FWisland_1 Protein 4e-31 43
CD241_0087 YP_005124356.1 ABC transporter ATP-binding protein Not tested Not named Protein 7e-39 41
DIP0090 NP_938487.1 ABC transporter ATP-binding protein Not tested Not named Protein 5e-39 41
SPN23F_09830 YP_002510959.1 lantibiotic transport ATP-binding protein Not tested PPI-1 Protein 1e-29 41