|
Name : ycdG (RBAM_003100) Accession : YP_001419940.1 Strain : Bacillus amyloliquefaciens FZB42 Genome accession: NC_009725 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0366 EC number : 3.2.1.10 Position : 281612 - 283291 bp Length : 1680 bp Strand : + Note : oligo-1,6-glucosidase YcdG DNA sequence : ATGGCGAGTGACTGGTGGAAAGACGCCGTTGTCTATCAAATCTATCCGCGAAGCTTTCAAGATACGAACGGCGACGGCAT TGGCGACCTGCGGGGGATTATCGCGCGTCTCGATTATATAAAAGAACTTGGCGCTGATGTGATATGGATCTGCCCGATTT ACCCGTCGCCAAACGTCGATAACGGCTACGATGTGACGGATCATCAAGCGATTATGGAATCTTACGGAACGATGGAGGAC TTTCACGATCTGCTTACAGAATGCCGCAGCCGCGGATTAAAGCTTGTGATGGATTTCGTCTTAAATCATACCTCCACGGA GCATCCTTGGTTCAAAGAGGCGGAAATGAATCCGGACAGCAAATACCGCGATTATTATATTTGGCGGCCGGGCACCGCGG ACGGCCCGCCGACCGATTGGGTGTCGGATTACGGACAATCCGTCTGGCAGTACGAAGAACATACGGGCGAATATTACCTG CATATGAACGCCGTCAAACAAGCCGATCTGAATTGGGAAAATCCCGAGGTTCGGCAATCAGTATACGAGATGATGAGATT TTGGCTCGATAAAGGCGTGGACGGATTGCGTATAGACCAGCTCCATCTTCTGTCAAAAAAAGAATATTTGCCGCCATATG AAGATTACATCGCCCGCCGGGCCGATCCGAAGCCTTTTCGGCCAAACGGGGCACGGATACATGATTACTTAAAAGAAATG ACGAAAGAGGTATTTTCCAAATATAACGTGATGTCGGTCGGTGAGGCCGGATCAGTGACGCCTGAAGAAGGGCTGGTCTA CACGGGAACCGATGAGCATGAGCTGAATATGATTTTTCATTTTCAGCATATGGAGCTTGATCAAAAGCCGGGCCAAGAGC ATTGGGATGTAAAACCGCTTGAGCTGTCCGATTTGAAGAAAGTGCTCACAGACTGGCAGGAAAAACTGGAACATCAAGGC TGGAATACGCTGTATTGGTGCAATCATGACCAGCCCCGGATCGTATCCCGTTTCGGAGACGAAGGCACATACCGCAAAGC ATCCGCCAAAATGCTTGCCGTCCTGCTTTATTTCATGAAAGGCACGCCGTACATTTACCAGGGGGAAGAAATCGGCATGA CAAACGCTCCGTTTGACAGAATAGAGGATTATCAAGATATTCAGACCGTCAATATGTATCATAAAAGGGTATTTGAAATG GGCCGCAACAGGGAAGAAGTCATGGTGTCTATTATGGCGAAAAGCCGTGACCATGCCCGTACACCGATGCAGTGGGACGG CAGCAAGAATGCCGGGTTTACAAAGGGAGAACCGTGGCTGAAGGTCAATCCCAATTACAAAACCGTCAATGCGGCCGAGG CTCAGGATGATCCCGATTCTGTATTGAACTTTTACAAAAAACTGATCCGCCTGCGAAAACAGTATGCTGATGTCATAAAA GGCAGCTACACGCTGCTGCTTCCTGATGACCCGCAGCTGTTTGTATATGAAAGACAAGCAAACGGACAAAAGCTCATCTC CATCAGCAACGTATCGAAAGAAGAAGCCGTCTTTTATTGGCCTGATGGCTCCAAACCTGAAAGCGCCGAGCTTCTTCTCA GCAACTATGATAATGACAGCGGCACGGAATCCCGCATCGCATTCCATCCTTATGAAACAAGAGTTTATCTGCTTGCCTGA Protein sequence : MASDWWKDAVVYQIYPRSFQDTNGDGIGDLRGIIARLDYIKELGADVIWICPIYPSPNVDNGYDVTDHQAIMESYGTMED FHDLLTECRSRGLKLVMDFVLNHTSTEHPWFKEAEMNPDSKYRDYYIWRPGTADGPPTDWVSDYGQSVWQYEEHTGEYYL HMNAVKQADLNWENPEVRQSVYEMMRFWLDKGVDGLRIDQLHLLSKKEYLPPYEDYIARRADPKPFRPNGARIHDYLKEM TKEVFSKYNVMSVGEAGSVTPEEGLVYTGTDEHELNMIFHFQHMELDQKPGQEHWDVKPLELSDLKKVLTDWQEKLEHQG WNTLYWCNHDQPRIVSRFGDEGTYRKASAKMLAVLLYFMKGTPYIYQGEEIGMTNAPFDRIEDYQDIQTVNMYHKRVFEM GRNREEVMVSIMAKSRDHARTPMQWDGSKNAGFTKGEPWLKVNPNYKTVNAAEAQDDPDSVLNFYKKLIRLRKQYADVIK GSYTLLLPDDPQLFVYERQANGQKLISISNVSKEEAVFYWPDGSKPESAELLLSNYDNDSGTESRIAFHPYETRVYLLA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| malL | YP_251987.1 | oligosaccharide alpha-1,6-glucosidase | Not tested | SCCmec | Protein | 2e-137 | 49 |
