Gene Information

Name : ytrE (RBAM_027350)
Accession : YP_001422324.1
Strain : Bacillus amyloliquefaciens FZB42
Genome accession: NC_009725
Putative virulence/resistance : Resistance
Product : hypothetical protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2862686 - 2863387 bp
Length : 702 bp
Strand : -
Note : hypothetical ABC transporter ATP-binding protein YtrE

DNA sequence : 
GTGTACGTGATAGAAGTACAGCATATTGATCATTCATTTAAAATCGGCAGGAAAGGCAGAGAGAGTGAGGTTCCGGTATT
GAAGGATGTCTCTTTGACCGTTGAAAAAGGGGAAATTGCCTGTATCGTCGGTCGGAGCGGTTCCGGAAAATCAACGCTTC
TGAATTTAATATCCGGATACATAGCGCCGACGAAGGGCCGTATCGTCATTAACGGCACTGATGTGACGGGCTTCAGTGAA
AAAGAGTGGGCGCAGTTCCGCCTCGGGCATTTCGGCTTTATTTTTCAAAGTTTTCAGCTCATTCCGAGTCTGACAACCTA
TGAAAATGTTGAAATGCCGCTTGCCTTAAAAGGCGTCAAACCGTCTGAACGCAAGCAGAAAGTCGCGGACATGCTGAAAC
GGGTCGGACTTGAGAATCATGCGAATCATTATCCGAATGAGCTGTCAGGCGGCCAGCAGCAGCGTGTTAGTATCGCAAGA
GCCCTGATTTTAAATCCGTCGATTATTTTAGCTGATGAGCCGACGGGAAGCCTTGATTCAGAAACGGAACTTGAGGTGCT
TGCGTTAATTCAGCAGCTGAACCGGGAGCGCGGGATTACATTTGTCATCATTACGCATGACGATGAAGTCGCTTCGATCG
CGCATTCAAAATTCCAGCTGCATGACGGTGTATTAAAAGGGGGCGTTACTGTTGAGATTTAA

Protein sequence : 
MYVIEVQHIDHSFKIGRKGRESEVPVLKDVSLTVEKGEIACIVGRSGSGKSTLLNLISGYIAPTKGRIVINGTDVTGFSE
KEWAQFRLGHFGFIFQSFQLIPSLTTYENVEMPLALKGVKPSERKQKVADMLKRVGLENHANHYPNELSGGQQQRVSIAR
ALILNPSIILADEPTGSLDSETELEVLALIQQLNRERGITFVIITHDDEVASIAHSKFQLHDGVLKGGVTVEI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-31 45
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-32 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-32 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-32 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ytrE YP_001422324.1 hypothetical protein NC_008702.1.4606598. Protein 4e-42 47
ytrE YP_001422324.1 hypothetical protein CP001581.1.gene598.p Protein 3e-38 45
ytrE YP_001422324.1 hypothetical protein NC_012469.1.7686878. Protein 5e-41 44
ytrE YP_001422324.1 hypothetical protein CP001581.1.gene798.p Protein 7e-37 43
ytrE YP_001422324.1 hypothetical protein NC_012469.1.7686946. Protein 4e-23 42