Gene Information

Name : araD (RBAM_025840)
Accession : YP_001422173.1
Strain : Bacillus amyloliquefaciens FZB42
Genome accession: NC_009725
Putative virulence/resistance : Unknown
Product : L-ribulose-5-phosphate 4-epimerase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0235
EC number : 5.1.3.4
Position : 2708525 - 2709214 bp
Length : 690 bp
Strand : -
Note : catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate; links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source

DNA sequence :
ATGCTTGAAGCGTTAAAAGAAGAAGTGCTCGCTGCCAATCTGAAGCTTGAGGAACATAACCTTGTCACGTTTACATGGGG
GAATGTCAGCGGCATCGACAGAGAGAGCGGGAGAATCGTCATTAAACCGAGCGGTGTCGATTACAGTGAGCTGACCGCTG
ACAAACTGGTCGTCCTGAATGAGGACGGAGACATTCTCGAAGGCTCGCTGAAACCGTCTTCTGACACGCCGACCCATCTT
TATCTGTATAAAGCGTTTCCGGCTATCGGCGGAATCGTTCATACGCACTCCCGCTGGGCGACGAGCTGGGCGCAGTCCGG
AAGAGACATACCCGCTCTCGGAACGACTCACGCGGATTACTTTGAAAGCGCTGTACCCTGCACGAGGGAAATGTATGAAG
AAGAAATTGTGAAAGATTACGAATATCATACAGGCAAAGTCATAGCCGAAACTTTTCAAAACGAACCGTATGAACAAAAT
CCGGGTGTCCTCGTCCACAGCCACGGCCCGTTCTGCTGGGGAACGGACGCGCTGAATGCCCTGCATAACGCCGTTGTGCT
CGAAACGGTAGCGGAAATGGCCTACCATTCGCTTATGCTGAACAAACAGCTCAGTCCGATCGACAGAGTGCTGCATGATA
AGCATTTTTACAGAAAACACGGGGCGAATGCTTATTATGGCCAAACTTGA

Protein sequence :
MLEALKEEVLAANLKLEEHNLVTFTWGNVSGIDRESGRIVIKPSGVDYSELTADKLVVLNEDGDILEGSLKPSSDTPTHL
YLYKAFPAIGGIVHTHSRWATSWAQSGRDIPALGTTHADYFESAVPCTREMYEEEIVKDYEYHTGKVIAETFQNEPYEQN
PGVLVHSHGPFCWGTDALNALHNAVVLETVAEMAYHSLMLNKQLSPIDRVLHDKHFYRKHGANAYYGQT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
araD YP_281517.1 L-ribulose-5-phosphate 4-epimerase Not tested Not named Protein 9e-52 54