Gene Information

Name : rph (RBAM_025440)
Accession : YP_001422133.1
Strain : Bacillus amyloliquefaciens FZB42
Genome accession: NC_009725
Putative virulence/resistance : Unknown
Product : ribonuclease PH
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0689
EC number : 2.7.7.56
Position : 2664653 - 2665390 bp
Length : 738 bp
Strand : -
Note : RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs

DNA sequence :
ATGAGACACGACGGAAGACAGCACGATGAGCTGCGCCCTATCACATTTGATTTGGATTTTATCACTCACCCGGAAGGCTC
TGTTTTAATTACAGCGGGAAATACGAAGGTCATCTGTAATGCATCTGTGGAAGACCGGGTGCCGCCATTTTTACGCGGCG
GAGGAAAAGGCTGGATCACAGCGGAATACAGCATGCTTCCCCGCGCGACGAATCAAAGAACGATAAGAGAATCTTCAAAA
GGAAAGGTCTCCGGCAGAACGATGGAAATTCAGCGGCTGATCGGGCGCGCGCTCCGGGCCGTCGTTGATTTGGAGAAGCT
CGGCGAACGGACGATCTGGATCGACTGTGACGTCATTCAAGCTGACGGCGGAACAAGAACGGCTTCCATTACCGGCGCCT
TCTTGGCAATGGCCATTGCGATCGGCAAACTCGTAAAAAGCGGCGTTATCAAAACATCTCCTGTGACAGATTATCTCGCG
GCCATTTCTGTCGGGATGGATAAAGAAGAAGGCCTTCTTTTGGATCTGAATTATGAAGAGGATTCGGCGGCTGAAGTCGA
CATGAATATTATCATGACGGGAAGCGGACGTTTTGTAGAGCTTCAAGGGACGGGCGAAGAAGCCACATTCTCCCGTGAAG
ATTTAAACGGACTGTTAAGCCTTGCCGAAAAAGGAATCCAGACGCTTATTCAAAAGCAAAAAGAAGTGCTGGGAGAAACA
TTGCCTGAACTGAAATAA

Protein sequence :
MRHDGRQHDELRPITFDLDFITHPEGSVLITAGNTKVICNASVEDRVPPFLRGGGKGWITAEYSMLPRATNQRTIRESSK
GKVSGRTMEIQRLIGRALRAVVDLEKLGERTIWIDCDVIQADGGTRTASITGAFLAMAIAIGKLVKSGVIKTSPVTDYLA
AISVGMDKEEGLLLDLNYEEDSAAEVDMNIIMTGSGRFVELQGTGEEATFSREDLNGLLSLAEKGIQTLIQKQKEVLGET
LPELK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 4e-58 58