Gene Information

Name : hemC (RBAM_025210)
Accession : YP_001422112.1
Strain : Bacillus amyloliquefaciens FZB42
Genome accession: NC_009725
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : -
Position : 2640518 - 2641459 bp
Length : 942 bp
Strand : -
Note : transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis

DNA sequence :
ATGAGAACGATTAAGGTAGGTTCCAGACGGAGCAAACTGGCTATGACCCAGACAAAATGGGTGATTAACAAATTGAAGGA
ATTGAACCCTTCCTATAACTTTGAAATCCGGGAGATTGTCACAAAAGGCGACCGCATCCTTGATGTTACACTGTCAAAAG
TGGGCGGCAAAGGTTTGTTTGTCAAAGAGATTGAACAGGCGCTGCTGCATCAGGAGATTGATATGGCGGTTCACAGCATG
AAAGACATGCCCGCCGTTTTGCCTGAGGGTCTTGTCATAGGCTGCATACCGAAACGTGAGGATCCGCGTGATGCGCTGAT
TTCAAAGGGGCATCAAAAGCTGGACGGCATAAAAGAAGGAGGCATCATCGGCACCAGCAGTTTAAGAAGAAGCGCCCAGA
TTCTTGCTGAACGCCCTGATCTTACAATTAAGTGGATCAGAGGCAATATTGATACGAGACTTCAAAAGCTTGAAACGGAA
GATTACGATGCTATTATTTTAGCGGCTGCGGGACTTTCGAGAATGGGCTGGAAAGATGATGTTGTATCTGAATTTCTCGA
ACCGGACCGCTGTCTGCCTGCGGTCGGCCAAGGCGCTCTTGCCATTGAATGCAGAGAGTCGGATGAGGAGCTTTTGAAGC
TGTTTGCGCAATTTACCGATGAGTATACGCAGCGCACGGTGGCAGCCGAACGGGCTTTCTTACACGCGATGGAAGGCGGC
TGCCAAGTGCCGATAGCCGGGTATGCGTCCGTCAATGACCGGGATGAGGTTGAATTGGTCGGTCTTGTCGCGTCTCCGGA
CGGAAAGACGATTTATAAAGAAACAGCGGCGGGACATGATCCGGAAGAAATCGGAAAACGCTGTGCGGCGATGATGTCTG
AAAAAGGAGCCAAAGCATTAATCGACAGTGTAAAACAGGAGCTCGATCAGGATGGCAAATGA

Protein sequence :
MRTIKVGSRRSKLAMTQTKWVINKLKELNPSYNFEIREIVTKGDRILDVTLSKVGGKGLFVKEIEQALLHQEIDMAVHSM
KDMPAVLPEGLVIGCIPKREDPRDALISKGHQKLDGIKEGGIIGTSSLRRSAQILAERPDLTIKWIRGNIDTRLQKLETE
DYDAIILAAAGLSRMGWKDDVVSEFLEPDRCLPAVGQGALAIECRESDEELLKLFAQFTDEYTQRTVAAERAFLHAMEGG
CQVPIAGYASVNDRDEVELVGLVASPDGKTIYKETAAGHDPEEIGKRCAAMMSEKGAKALIDSVKQELDQDGK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 1e-59 48
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 1e-59 48