Gene Information

Name : yrhB (RBAM_024350)
Accession : YP_001422026.1
Strain : Bacillus amyloliquefaciens FZB42
Genome accession: NC_009725
Putative virulence/resistance : Resistance
Product : cystathionine beta-lyase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0626
EC number : -
Position : 2555609 - 2556751 bp
Length : 1143 bp
Strand : -
Note : catalyzes the formation of L-homocysteine from cystathionine

DNA sequence :
ATGAAGAAAAAAACGCTGATGGTGCACGGAGGAATTACGGGAGATGAAAAAACAGGAGCGGTTTCCGTACCGATTTATCA
AGTAAGCACGTACCAACAGCCGAAAGCGGGCGAGCATACGGGTTATGAATATTCAAGAACGGCCAATCCGACGCGCACGG
CGCTTGAAAGCTTAATTGCGGAGCTTGAAGGCGGCGCGGCGGGATATGCGTTCGGCTCAGGCATGGCTGCGATTACTGCC
GTCATGATGCTGTTTGACAGCGGCGATCATGTTATTTTGACGGATGATGTATACGGCGGCACTTACCGGGTGATGACAGG
CGTGCTGAACCGCTTCGGCATTGAAGCGGACTTTGTCGATACGAGCAGCAAAGAAAAAGTCCAAAAAGCCATTCGCCCGA
ATACGAAAGCCATTTATATCGAAACACCGACAAACCCGCTATTGAAAGTGACTGACCTCAAACTGATGTCTGACATCGCA
AAAGAAGCGGGTGTATTGCTTATCGTCGATAATACGTTTTACACGCCGTATTTCCAACAGCCGCTGAGCTTCGGAGCGGA
CATCGTGCTTCACAGCGCGACAAAATATCTCGGCGGCCACAGTGATGTCGTCGGCGGCTTAGTCGTTACGGCTGATAAAG
AACTGGGCGAAAAGCTTCATTATGTGCAAAACTCAACGGGCGGCGTTTTAGGACCGCAGGATTCATGGCTTTTGATGAGA
GGCATTAAAACGCTGGGACTCAGAATGGATGCCATCAATTACAGCGCCGGAAAAATCGCCGGGCTGCTTGAAGCGCATGA
TGCCGTTCAGACGCTCTACTATCCCGGATCAGCGAAACACCCGGGCCATGAGCTGACAAAAGCGCAAAGCTCCGGTTTCG
GCGGAATGATTTCCTTTGATGTCGGCAGCAGCGAACGCGTCGACGCGTTTTTAGAAAAATTGAACCTGTTTACGATCGCG
GAAAGTTTAGGAGCGGTTGAAAGCTTAATCTCCGTGCCGTCCAGAATGACGCACGCATCGATCCCGCGCGACCGCCGGCT
TGCGCTTGGCATTACCGACGGGCTCGTGCGGATCTCAGTCGGTATTGAGGATACTGAGGATTTAACGGCGGATGTGAAAC
AGGCGCTTGATTCACTTTTATAA

Protein sequence :
MKKKTLMVHGGITGDEKTGAVSVPIYQVSTYQQPKAGEHTGYEYSRTANPTRTALESLIAELEGGAAGYAFGSGMAAITA
VMMLFDSGDHVILTDDVYGGTYRVMTGVLNRFGIEADFVDTSSKEKVQKAIRPNTKAIYIETPTNPLLKVTDLKLMSDIA
KEAGVLLIVDNTFYTPYFQQPLSFGADIVLHSATKYLGGHSDVVGGLVVTADKELGEKLHYVQNSTGGVLGPQDSWLLMR
GIKTLGLRMDAINYSAGKIAGLLEAHDAVQTLYYPGSAKHPGHELTKAQSSGFGGMISFDVGSSERVDAFLEKLNLFTIA
ESLGAVESLISVPSRMTHASIPRDRRLALGITDGLVRISVGIEDTEDLTADVKQALDSLL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 4e-111 62
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 6e-110 62
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 3e-73 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yrhB YP_001422026.1 cystathionine beta-lyase BAC0207 Protein 3e-65 43