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Name : xerD (RBAM_021620) Accession : YP_001421754.1 Strain : Bacillus amyloliquefaciens FZB42 Genome accession: NC_009725 Putative virulence/resistance : Unknown Product : site-specific tyrosine recombinase XerD Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4974 EC number : - Position : 2251648 - 2252538 bp Length : 891 bp Strand : - Note : site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers d DNA sequence : GTGAAGGATCAAATTAAGGATTTCATCCATTATGTGAGGGTTGAAAGAGGGCTGTCCCAAAATACGATGATGTCCTATGA GCGTGATCTGAAAAGTTATTCTCTCTTCTTAACTGAAACCCTTCAGATCACTTCATGGAATGATGTGACCCGTCTTCATA TTATTCAATATTTAAAGCATATAAAGGACTCCGGGAAATCAGGCAAGACGTCTGCGAGGCATTTGGCGTCAATCCGGTCT TTTCATCAATTTCTGTTAAGGGAAAAAGCCGCGGATAAAGATCCTTCGGTACATATTGAAACACAAAAAACAGAGCGGAC GCTTCCGAAAGTATTGGCGCTTCACGAAGTTGAGCGGTTATTGGACACGCCTAAGCTTGACAGCCCGTTCGGCCTCAGGG ATAAAGCCATGCTTGAACTGCTGTACGCGACCGGCATCAGGGTCAGCGAGATGATCGAGCTGAAATTATCCGACGTCCAT TTGACGATGGGATTTGTCCGCTGCTTCGGAAAAGGGCGGAAAGAGCGGATTGTGCCGATTGGTGAAGCCGCTTCTCATGC GATAGAAGCATACATTGAAAAAGCCAGAGGGAAATTATTAAAGAAAAACGTAACCGAAGCGCTTTTTCTGAATCATCACG GCAGGCAGATCAGCCGTCAGGGATTCTGGAAAAACCTAAAAAAAATCGCACTTGAAGCGGGGATTAAAAAAGAGCTGACA CCGCACACGCTCCGGCACTCCTTTGCAACGCACCTGCTCGAAAACGGGGCGGATCTGCGCGCCGTGCAGGAGATGCTCGG ACATGCCGATATTTCCACCACGCAAATTTATACGCATGTGACGAAAACAAGGCTGAAGGACGTGTACAAACAGTATCATC CGCGCGCTTAG Protein sequence : MKDQIKDFIHYVRVERGLSQNTMMSYERDLKSYSLFLTETLQITSWNDVTRLHIIQYLKHIKDSGKSGKTSARHLASIRS FHQFLLREKAADKDPSVHIETQKTERTLPKVLALHEVERLLDTPKLDSPFGLRDKAMLELLYATGIRVSEMIELKLSDVH LTMGFVRCFGKGRKERIVPIGEAASHAIEAYIEKARGKLLKKNVTEALFLNHHGRQISRQGFWKNLKKIALEAGIKKELT PHTLRHSFATHLLENGADLRAVQEMLGHADISTTQIYTHVTKTRLKDVYKQYHPRA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00307 | YP_008207772.1 | Site-specific recombinase XerD | Not tested | AbaR25 | Protein | 9e-55 | 43 |
| BJAB0868_00311 | YP_008211637.1 | Site-specific recombinase XerD | Not tested | AbaR26 | Protein | 9e-55 | 43 |
