Gene Information

Name : yocR (RBAM_019090)
Accession : YP_001421502.1
Strain : Bacillus amyloliquefaciens FZB42
Genome accession: NC_009725
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG0733
EC number : -
Position : 2026979 - 2028316 bp
Length : 1338 bp
Strand : -
Note : sodium-dependent transporter YocR

DNA sequence :
GTGAAAGAAGCTAATCAATGGTCATCTAAGCTGGGATTTATTTTAGCTACGGCCGGCTCTGCAATCGGGCTCGGCGCAAT
ATGGAAGTTCCCTTACGTAGCGGGAACCAGCGGAGGCGGCGCTTTTCTGCTTATTTTTATTTTATTTACTGTTTTAATCG
GACTGCCGCTTTTGCTTGCTGAATTTATTATCGGCAGAAAAACACAAAAAAACGCCGTTGAATCCTATAAGGCGCTCGCG
CCGGGGAAAAAGTGGCACTGGATCGGATATCTCGGAATCATTACGTGTTTTATTCTATTATCCTTCTACAGCGTAGTGGG
GGGATGGATATTAATCTACATTATAAAAGGCTTTACAGGCGGCTTATCGCTTTCTTCGGGATTTGATACGTTATTTATCG
ATACCATTTCAAATCCTTATGCAGCCGTTTTCGGCCAGCTGCTGTTTATCGTGCTGACGATTTTAGTTGTGGCAAAAGGG
GTGAGCAGCGGCATTGAAAAAGTGAGCCAGGTGTTGATGCCGGCTCTGTTTATTCTGTTTATTCTCTTAATGATCCGCTC
CGTTACGCTGCATGATGCAGCAAAAGGATTAAAATTCTTTTTTATGCCTGATTTTGGCGCGATGGATGCCAATACTATTT
TATATGCGATGGGACAATCATTTTTCTCGTTAAGCGTCGGAGTGTCCGTAATGGTTACATACAGCGCATATTTAGAAAAA
GAAGAAAATATTGTTCAATCCGCCGTATCGGTGACGGTATTAAATGTCCTTGTTGCTGTGATGGCGGGAGTGGCGATTTT
TCCGGCGGTGTTTGCATTCGGCCTCAAGCCGGATCAAGGCCCGCAGCTTTTATTTAACGTGCTGCCGACCGTCTTTAATC
AAATGCCGTTGGGCATCGTGTTTTTACTCGCCTTTTTGCTGCTGTTTTTATTTGCGACGCTGACATCGGCTTTTTCAATG
CTTGAAATTTTAGTTGCTGTTTTGTCAAAAGGCGATTCGGCAAAACGGAAGCGGTATGCATGGATCGGGGGACTTGCTAT
ATTTATTGTCGGGGTCCCTTCGGCGCTGTCGTACGGAATCTTGAGTGATGTTTCTATTTTTCACCGCAGTATTTTTGACG
CTGCGGATTTTCTGGTCAGCAATGTCTTAATGCCGCTGGGCGCGCTTTTAATTGCCGTTTTCGTACCGTTGAAAATCCCG
AAACAGATGCTGTTTGACGAACTGAAAAGCGGTTCCGGTATAAAACGAAAATGGTTTGCAGTCTGGCTCCTATTAATCCG
TTATGTGGCTCCTGTAGCCATTATTATCGTTTTTCTGCACGTCCTTGGTATTTTTTAA

Protein sequence :
MKEANQWSSKLGFILATAGSAIGLGAIWKFPYVAGTSGGGAFLLIFILFTVLIGLPLLLAEFIIGRKTQKNAVESYKALA
PGKKWHWIGYLGIITCFILLSFYSVVGGWILIYIIKGFTGGLSLSSGFDTLFIDTISNPYAAVFGQLLFIVLTILVVAKG
VSSGIEKVSQVLMPALFILFILLMIRSVTLHDAAKGLKFFFMPDFGAMDANTILYAMGQSFFSLSVGVSVMVTYSAYLEK
EENIVQSAVSVTVLNVLVAVMAGVAIFPAVFAFGLKPDQGPQLLFNVLPTVFNQMPLGIVFLLAFLLLFLFATLTSAFSM
LEILVAVLSKGDSAKRKRYAWIGGLAIFIVGVPSALSYGILSDVSIFHRSIFDAADFLVSNVLMPLGALLIAVFVPLKIP
KQMLFDELKSGSGIKRKWFAVWLLLIRYVAPVAIIIVFLHVLGIF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0458 YP_039907.1 sodium:neurotransmitter symporter family protein Not tested vSa¥á Protein 9e-70 48
SAS0416 YP_042543.1 sodium:neurotransmitter symporter family protein Not tested vSa¥á Protein 9e-70 48