Gene Information

Name : xylA (RBAM_017350)
Accession : YP_001421329.1
Strain : Bacillus amyloliquefaciens FZB42
Genome accession: NC_009725
Putative virulence/resistance : Unknown
Product : xylose isomerase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG2115
EC number : 5.3.1.5
Position : 1801447 - 1802784 bp
Length : 1338 bp
Strand : +
Note : catalyzes the interconversion of D-xylose to D-xylulose

DNA sequence :
ATGGCTCACTCTCATTCCGGTTCGGTCAACTATTTTGAAAGCGCAAACAAAGTGATTTACGAAGGGAAAGAATCCACGAA
TCCTTTAGCATTTAAATACTATAATTCTCAAGAAGTAATTGGCGGAAAAACGATGAAAGAGCATTTGCGATTTTCTATTG
CCTATTGGCATACATTTACCGCTGACGGCACAGACATTTTTGGCGCAGCTACGATGCAGAGACCGTGGGATCACTATAAA
GGCATGGATCTGGCGAGAGCGAGGGTAGATGCAGCGTTTGAGCTGTTTGAAAAACTGGATGCGCCATTTTTTGCTTTTCA
TGACCGGGATATCGCACCGGAAGGAAGTACGTTAAAAGAGACAAATCAAAATCTGGATTTAATCGTGGATATGATAAAAG
ACTACATGAGAACCAGCGGCGTTAAGTTATTATGGAATACTGCAAACATGTTTACGAATCCCCGTTTCGTCCATGGTGCG
GCGACTTCTTGTAACGCAGATGTATTTGCGTATGCCGCAGCCCAAGTAAAAAAAGGATTAGAAACAGCAAAAGAGCTTGG
CGCGGAGAACTATGTATTTTGGGGCGGACGTGAAGGGTACGAAACTTTGTTAAATACCGATTTAAAATTTGAGCTTGATA
ATATGGCCAGATTTATGCATATGGCAGTGGATTATGCGAAGGAAATCGGGTATACAGGGCAGTTTTTGATTGAACCAAAA
CCAAAAGAGCCGACCACCCATCAATATGATACGGACGCAGCAACAACTATTGCCTTTTTAAAGCAATATGGCTTAGACAA
TCATTTTAAATTAAATCTCGAAGCCAATCATGCCACATTAGCCGGGCATACATTCGAACATGAATTACGCATGGCGAGAG
TGCATGGCCTTCTTGGCTCTGTTGACGCGAATCAGGGTGATCCGCTTTTAGGCTGGGACACAGATGAATTTCCGACAGAT
TTATATTCTGCGACATTAGCAATGTACGAAATCCTGAAAAATGGCGGTCTTGGAAGCGGAGGATTAAACTTTGACGCAAA
GGTCAGGAGATCTTCTTTTGAGCCTGATGATTTACTATATGCCCATGTTGCAGGGATGGATACATTTGCAAGAGGATTGA
AAGCCGCCCGCAAATTAATCGAAGATCGTGTGTTTGAAGATGTGATTCAACACCGTTACCGCAGCTTTACTGAAGGGATT
GGGCTTGAAATTGCAGAAGGAAGAGCTGATTTTAAGACACTTGAGCAATATGCGCTGAACAATCAGCCAATTAAAAACGA
ATCAGGTAGACAGGAGCGGTTAAAAGCGATATTAAACCAATACATTTTACAGGTATAA

Protein sequence :
MAHSHSGSVNYFESANKVIYEGKESTNPLAFKYYNSQEVIGGKTMKEHLRFSIAYWHTFTADGTDIFGAATMQRPWDHYK
GMDLARARVDAAFELFEKLDAPFFAFHDRDIAPEGSTLKETNQNLDLIVDMIKDYMRTSGVKLLWNTANMFTNPRFVHGA
ATSCNADVFAYAAAQVKKGLETAKELGAENYVFWGGREGYETLLNTDLKFELDNMARFMHMAVDYAKEIGYTGQFLIEPK
PKEPTTHQYDTDAATTIAFLKQYGLDNHFKLNLEANHATLAGHTFEHELRMARVHGLLGSVDANQGDPLLGWDTDEFPTD
LYSATLAMYEILKNGGLGSGGLNFDAKVRRSSFEPDDLLYAHVAGMDTFARGLKAARKLIEDRVFEDVIQHRYRSFTEGI
GLEIAEGRADFKTLEQYALNNQPIKNESGRQERLKAILNQYILQV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
xylA NP_814326.1 xylose isomerase Not tested Not named Protein 5e-126 64
ef0082 AAM75286.1 EF0082 Not tested Not named Protein 4e-126 64