|
Name : nrdE (RBAM_017180) Accession : YP_001421312.1 Strain : Bacillus amyloliquefaciens FZB42 Genome accession: NC_009725 Putative virulence/resistance : Unknown Product : ribonucleotide-diphosphate reductase subunit alpha Function : - COG functional category : F : Nucleotide transport and metabolism COG ID : COG0209 EC number : 1.17.4.1 Position : 1782366 - 1784468 bp Length : 2103 bp Strand : + Note : Catalyzes the rate-limiting step in dNTP synthesis DNA sequence : TTGTCACAAAATCAAGTGCCAAAATGGATCCAGTTAAATAACGAAATCATGATCCAACAAGATGGAAAATTCCAGTTTGA TAAAGATAAAGAGGCTGTACATAGCTATTTTGTTGACTATATCAATCAAAACACAGTTTACTTTCACGATTTAAAAGAGA AGCTGGATTATTTGATTGAAAACCAATACTACGAAGAGGAATTCTTAAGCCTTTACTCTTTTGAAGACATTAAAGAAGTG TTTAAGACAGCTTACGCAAAGAAGTTTCGTTTTCCTTCCTTCATGAGTGCGTTTAAATTTTATAATGACTATGCTTTGAA AACGAATGACAAGAAAAGAATCCTCGAGCGTTATGAGGACCGAATCTCAATCGTCGCGCTGTTCTTCGCAAACGGCGACA CTGAGAAAGCAAAAGAATATGTAAACCTGATGATCAACCAGGAATATCAGCCGAGTACACCGACATTTTTGAATGCCGGC AGAAAACGCCGCGGAGAACTGGTGAGCTGCTTCTTGCTCGAAGTCAATGATTCCTTAAACGATATTTCACGGGCGATCGA TATTTCCATGCAGCTGTCTAAATTGGGCGGCGGGGTTTCTCTTAATCTGTCCAAGCTTCGCGCGAAAGGCGAAGCGATTA AAGATGTTGAAAACGCCACAAAAGGTGTTGTAGGCGTCATGAAGCTTCTTGATAATGCGTTCCGTTACGCTGACCAAATG GGCCAAAGACAAGGCTCAGGCGCGGCGTATTTAAATATTTTCCACCGCGATATCAATGATTTTCTTGATACGAAAAAGAT TTCTGCGGATGAAGATGTGCGCGTCAAAACGCTTTCTATCGGTGTCGTCATTCCGGATAAGTTCGTTGAGCTTGCACGTG AGGATAAAGCGGCTTATGTATTCTATCCGCATACGATTTATAAAGAATACGGCCAGCATATGGACGAAATGGACATGACG GCGATGTATGAAGAGCTTGTCGACAACCCTCGTGTCAAAAAAGAAAAAGTGAATGCGCGCAAATTGCTTGAAAAGCTTGC CGTTCTCCGTTCTGAGTCAGGTTATCCGTACATTATGTTCCAGGACAACGTAAACAAAGAGCACGCGAATAACCACGTAT CAAAAGTGAAATTCTCGAACCTTTGCTCTGAAGTGCTTCAGGCGTCACAAGTTTCGGCTTACACAGATTATGATGAAGAA GACGAAATCGGCTTGGACATTTCCTGCAACCTTGGTTCATTAAATATTTTGAATGTCATGAAACATAAATCGATTGAGCG CACGGTGAAACTCGCGACGGATTCCCTGACTCATGTATCTGAGACGACGGATATCCGCAACGCGCCGGCAGTCAGACGCG CGAACAAAGCGATGAAGTCGATCGGTTTAGGCGCCATGAACCTTCACGGCTACCTGGCCCAAAACGGCATCGCGTATGAA AGCCCGGAAGCAAGAGATTTCGCGAATACGTTCTTTATGATGGTGAACTTTTATTCCATCCAGCGTTCAGCTGAGCTTGC GAAAGAAAAAGGCGAAACGTTTGAGCATTATGAAGGCTCCACTTATGCAACGGGAGAATATTTCAATAAATACATCGAAA AAGAGTTCTCACCGGCATACGAAAAAATCGCTGCGCTCTTTGAAGGCATGCACATTCCGACAATCGAAGACTGGAAAGAG TTGAAGGCGTTTGTCGCTGAAAACGGCATGTACCACAGCTACAGACTGTGCATCGCGCCGACAGGTTCCATTTCCTACGT CCAATCCAGCACGGCGTCCGTTATGCCGATCATGGAACGGATCGAAGAAAGAACATACGGAAATTCAAAAACGTATTACC CGATGCCGGGGTTAGCGTCTAATAACTGGTTCTTCTACAAAGAAGCTTATGATATGGACATGTTCAAAGTGGTGGATATG ATCGCGACAATCCAGCAGCATATCGATCAGGGAATCAGCTTTACCCTGTTTTTGAAAGATACGATGACAACTCGTGATCT GAACCGTATTGATCTGTATGCCCACCATAGAGGCATCAAAACCATTTACTATGCAAGAACGAAAGATACCGGGCAGGACA GCTGTCTTTCTTGTGTCGTTTGA Protein sequence : MSQNQVPKWIQLNNEIMIQQDGKFQFDKDKEAVHSYFVDYINQNTVYFHDLKEKLDYLIENQYYEEEFLSLYSFEDIKEV FKTAYAKKFRFPSFMSAFKFYNDYALKTNDKKRILERYEDRISIVALFFANGDTEKAKEYVNLMINQEYQPSTPTFLNAG RKRRGELVSCFLLEVNDSLNDISRAIDISMQLSKLGGGVSLNLSKLRAKGEAIKDVENATKGVVGVMKLLDNAFRYADQM GQRQGSGAAYLNIFHRDINDFLDTKKISADEDVRVKTLSIGVVIPDKFVELAREDKAAYVFYPHTIYKEYGQHMDEMDMT AMYEELVDNPRVKKEKVNARKLLEKLAVLRSESGYPYIMFQDNVNKEHANNHVSKVKFSNLCSEVLQASQVSAYTDYDEE DEIGLDISCNLGSLNILNVMKHKSIERTVKLATDSLTHVSETTDIRNAPAVRRANKAMKSIGLGAMNLHGYLAQNGIAYE SPEARDFANTFFMMVNFYSIQRSAELAKEKGETFEHYEGSTYATGEYFNKYIEKEFSPAYEKIAALFEGMHIPTIEDWKE LKAFVAENGMYHSYRLCIAPTGSISYVQSSTASVMPIMERIEERTYGNSKTYYPMPGLASNNWFFYKEAYDMDMFKVVDM IATIQQHIDQGISFTLFLKDTMTTRDLNRIDLYAHHRGIKTIYYARTKDTGQDSCLSCVV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cur_1481 | YP_001800875.1 | ribonucleotide-diphosphate reductase subunit alpha | Not tested | Not named | Protein | 1e-165 | 48 |
