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Name : serS (RBAM_000160) Accession : YP_001419692.1 Strain : Bacillus amyloliquefaciens FZB42 Genome accession: NC_009725 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 20661 - 21938 bp Length : 1278 bp Strand : + Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGATTGATACGAAGGTGCTGAGAGCCAATTTTCAAGAGGTGAAAGCGAAGCTCATTCCAAAAGGCGAAGACTTATCTGA CTTTGACAAGTTTGAAGAGCTGGACGAAAAGAGAAGAGAGCTTATCGGTAAAGTAGAAGAACTGAAGGGAAAACGCAATG AAGTATCTCAGCAGGTCGCCGTTTTGAAACGGGAGAAAAAAGACGCTGATCATATTATTAAAGAGATGCGCGAAGTGGGC GAAGAAATTAAGAAGCTTGATGAAGAGCTTCGTACTGTCGAAACGACGCTCGAAACCATCCTTCTGTCTATTCCGAACAT CCCGCACGATTCAGTGCCCGTTGGGGAAACGGAAGATGATAACATTGAAATCCGCAAGTGGGGAGAGGCGCCGGCATTTT CATATGAGCCGAAACCGCATTGGGATATCGCAGACCATTTAAACATTCTTGATTTCGAACGCGCTTCAAAAGTAACAGGC AGCCGGTTTGTGTTTTATAAAGGATTAGGCGCCCGCCTCGAACGCGCGCTCTACAACTTTATGCTGGATCTTCACGTTGA TGAATATGATTACACGGAAGTCATTCCTCCTTATATGGTAAACCGTACGAGCATGACAGGTACGGGACAGCTTCCTAAAT TTGAAGAGGATGCTTTTAAAATCAGAGAAGAAGATTATTTCTTAATTCCGACGGCGGAAGTGCCGATTACAAATATGCAC CGCGATGAAATCTTATCCGGTGAGAACCTGCCGATCAATTATGCCGCATTCAGCGCTTGCTTCCGTTCAGAAGCGGGATC TGCCGGCCGTGATACACGCGGTTTGATCCGCCAGCATCAGTTCAACAAGGTTGAGCTTGTGAAATTCGTGAAGCCGGAAG ATTCTTATGAAGAGCTTGAAAAACTGACGAATCAAGCTGAGCGGGTGCTTCAGCTGCTTGAACTGCCGTATCGTGTCATG AGCATGTGTACCGGTGATCTCGGCTTTACAGCCGCGAAAAAGTACGATATTGAGGTATGGATTCCAAGCCAAGACACATA CCGTGAAATTTCTTCTTGCAGTAACTTTGAGGCCTTCCAGGCGAGACGCGCAAACATTCGATTCAGACGCGAAGCGAAAG GCAAGCCGGAGCATGTGCATACATTAAACGGTTCAGGTCTTGCAGTCGGCAGAACAGTAGCTGCCATCTTAGAAAACTAT CAGCAGGAAGACGGAAGTGTCATCATTCCGAAAGTGCTTCGTCCTTATATGGGAAATAAAGAAGTCATCAAACCGTAA Protein sequence : MIDTKVLRANFQEVKAKLIPKGEDLSDFDKFEELDEKRRELIGKVEELKGKRNEVSQQVAVLKREKKDADHIIKEMREVG EEIKKLDEELRTVETTLETILLSIPNIPHDSVPVGETEDDNIEIRKWGEAPAFSYEPKPHWDIADHLNILDFERASKVTG SRFVFYKGLGARLERALYNFMLDLHVDEYDYTEVIPPYMVNRTSMTGTGQLPKFEEDAFKIREEDYFLIPTAEVPITNMH RDEILSGENLPINYAAFSACFRSEAGSAGRDTRGLIRQHQFNKVELVKFVKPEDSYEELEKLTNQAERVLQLLELPYRVM SMCTGDLGFTAAKKYDIEVWIPSQDTYREISSCSNFEAFQARRANIRFRREAKGKPEHVHTLNGSGLAVGRTVAAILENY QQEDGSVIIPKVLRPYMGNKEVIKP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 3e-131 | 63 |
