Gene Information

Name : clpQ (RBAM_015980)
Accession : YP_001421192.1
Strain : Bacillus amyloliquefaciens FZB42
Genome accession: NC_009725
Putative virulence/resistance : Unknown
Product : ATP-dependent protease peptidase subunit
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG5405
EC number : -
Position : 1603394 - 1603939 bp
Length : 546 bp
Strand : +
Note : heat shock protein involved in degradation of misfolded proteins

DNA sequence :
ATGTCATCTTTTCATGCGACAACGATTTTTGCCGTCCAGCATAACGGGAAAAGCGCTATGTCAGGAGACGGCCAGGTCAC
ATTCGGTCAGGCTGTAGTCATGAAACATACCGCGAGAAAGGTGAGAAAGCTGTTTAACGGAAAGGTTCTGGCCGGATTTG
CGGGATCTGTTGCAGACGCTTTCACACTTTTTGAAATGTTTGAGGCGAAGCTTGAAGAATACAACGGCAATTTAAAACGT
GCGTCGGTTGAGCTTGCGAAAGAATGGCGCAGCGATAAAGTGCTGCGCAAGCTGGAAGCCATGCTGATTGTCATGAACCA
GGATACCTTGCTTCTCGTATCGGGAACAGGTGAAGTGATTGAGCCGGATGACGGCATTTTGGCAATCGGCTCCGGCGGAA
ACTACGCCCTGTCAGCAGGAAGAGCGCTGAAAACCTATGCCGGAGAGAATCTGTCCGCCAAAGATATTGCAAAAGCCGCT
TTGAAAATCGCGGGCGAGATTTGTGTGTACACAAACGATCAGATCATTTTGGAAGAACTTGAATAG

Protein sequence :
MSSFHATTIFAVQHNGKSAMSGDGQVTFGQAVVMKHTARKVRKLFNGKVLAGFAGSVADAFTLFEMFEAKLEEYNGNLKR
ASVELAKEWRSDKVLRKLEAMLIVMNQDTLLLVSGTGEVIEPDDGILAIGSGGNYALSAGRALKTYAGENLSAKDIAKAA
LKIAGEICVYTNDQIILEELE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hslV YP_003728752.1 protein HslV Not tested cag PAI Protein 5e-33 52