Gene Information

Name : lspA (RBAM_015280)
Accession : YP_001421122.1
Strain : Bacillus amyloliquefaciens FZB42
Genome accession: NC_009725
Putative virulence/resistance : Virulence
Product : lipoprotein signal peptidase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0597
EC number : 3.4.23.36
Position : 1531504 - 1531965 bp
Length : 462 bp
Strand : +
Note : lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis

DNA sequence :
GTGCTTTATTATCTAATCGCTCTTTTTATTATTATTGCCGACCAATTGACCAAATGGCTTGTTGTCAGCCATATGGAATT
GGGACAAAGCATACCTGTCATCGATCAGGTGCTTTATATCACATCTCATCGCAACACGGGAGCGGCGTGGGGTATTTTAG
CCGGCCAAATGTGGTTTTTCTACGTCATTACCATCGCCGTGATTATCGGAATCGTTTATTACATACAGCGTTATGCAAAA
GGGCAGATGTTACTCGGAATTTCTCTCGGCTTAATGCTGGGCGGTGCGGCCGGAAACTTTATTGACCGGGCGGCGCGCCA
GGAAGTGGTGGATTTTATTCATGTCATCATCGTGGATTATCACTATCCGATATTTAATATCGCGGACTCCTCACTGTGCG
TCGGTGTAATACTTTTATTTATTCATATGCTGTTTGACAGCGGGAAAAAGAAGGAGCAATAA

Protein sequence :
MLYYLIALFIIIADQLTKWLVVSHMELGQSIPVIDQVLYITSHRNTGAAWGILAGQMWFFYVITIAVIIGIVYYIQRYAK
GQMLLGISLGLMLGGAAGNFIDRAARQEVVDFIHVIIVDYHYPIFNIADSSLCVGVILLFIHMLFDSGKKKEQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SE0072 NP_763627.1 lipoprotein signal peptidase Not tested SCCpbp4 Protein 3e-15 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lspA YP_001421122.1 lipoprotein signal peptidase VFG2161 Protein 1e-25 58