Gene Information

Name : rpmF (RBAM_014940)
Accession : YP_001421088.1
Strain : Bacillus amyloliquefaciens FZB42
Genome accession: NC_009725
Putative virulence/resistance : Unknown
Product : 50S ribosomal protein L32
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0333
EC number : -
Position : 1492105 - 1492284 bp
Length : 180 bp
Strand : +
Note : some L32 proteins have zinc finger motifs consisting of CXXC while others do not

DNA sequence :
ATGGCTGTACCTTTTAGAAGAACTTCTAAAATGAAAAAAAGATTGCGCCGTACACATTTCAAACTAAATGTACCTGGTAT
GACAGAATGCCCGTCATGCGGAGAGATGAAATTGTCTCACCGTGTATGTAAAGCATGCGGATCATACAACGGCAAAGACA
TAAATGTTAAAAGCAATTAA

Protein sequence :
MAVPFRRTSKMKKRLRRTHFKLNVPGMTECPSCGEMKLSHRVCKACGSYNGKDINVKSN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rpmF NP_814315.1 50S ribosomal protein L32 Not tested Not named Protein 3e-04 52
ef0071 AAM75276.1 EF0071 Not tested Not named Protein 2e-04 52
rpmF NP_814351.1 50S ribosomal protein L32 Not tested Not named Protein 0.004 49
ef0104 AAM75307.1 EF0104 Not tested Not named Protein 0.003 49