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Name : pdhD (RBAM_014450) Accession : YP_001421039.1 Strain : Bacillus amyloliquefaciens FZB42 Genome accession: NC_009725 Putative virulence/resistance : Unknown Product : dihydrolipoamide dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1249 EC number : 1.8.1.4 Position : 1449118 - 1450530 bp Length : 1413 bp Strand : + Note : E3 component of pyruvate complex; catalyzes the oxidation of dihydrolipoamide to lipoamide DNA sequence : ATGGTAGTAGGAGATTTCCCTATTGAAACAGATACTCTTGTGATTGGTGCGGGACCCGGCGGCTATGTAGCTGCCATCCG CGCTGCTCAGCTTGGACAAAAAGTAACAGTCGTTGAAAAAGCAACTCTTGGAGGCGTTTGTCTGAACGTCGGCTGTATTC CTTCAAAAGCGCTCATCAATGCAGGCCATCGTTACGAGAATGCAAAACATTCAGATGACATGGGGATCACTGCTGAGAAC GTAACGGTTGACTTTACAAAAGTCCAAGAATGGAAAGCTTCTGTTGTAAATAAGCTTACCGGCGGTGTTGCAGGTCTTTT AAAAGGAAATAAAGTGGACGTTATAAAAGGGGAAGCTTATTTCGTAGACAGCAACTCTGTCCGCGTAATGGATGAGAACT CTGCGCAAACATACACATTTAAAAACGCAATCATTGCTACCGGTTCTCGCCCTATCGAATTGCCAAACTTCAAATATAGC GAACGCGTTCTGAACTCTACAGGCGCACTTGCGCTTAAAGAAATTCCGAAAAAGCTCGTTGTTATCGGCGGCGGATATAT CGGTACTGAGCTTGGAACAGCGTATGCGAACTTCGGAACTGAATTGGTTATTTTAGAAGGCGGAGATGAAATTCTTCCTG GCTTCGAAAAACAAATGAGTTCTCTCGTTACCCGCAGACTGAAGAAAAAAGGCAACGTTGAAATCCATACAAGCGCCATG GCTAAAGGCGTTGAGGAAAGACCTGACGGCGTAACAGTTACATTCGAAGTAAAAGGCGAAGAAAAAACGGTTGATGCTGA TTACGTATTAATCACTGTCGGACGCCGTCCGAACACTGATGAGCTCGGCCTTGAGCAAGTCGGTATCGAAATGACTGACC GCGGTGTCATTAAAACAGACAAGCAGTGCCGCACAAACGTACCGAACATTTACGCAATCGGTGACATCATTGACGGACCT CCATTGGCTCACAAAGCGTCTTACGAAGGTAAAATCGCTGCCGAAGCTATTTCAGGAGAGCCGGCTGAAATCGATTACCT CGGTATTCCGGCGGTTGTATTCTCTGAGCCTGAACTGGCTTCTGTCGGTTACACTGAAGCACAGGCGAAAGAAGAAGGTA TTGAAGTCGTTGCAGCTAAGTTCCCGTTTGCAGCAAACGGACGTGCGCTGTCTCTTAACGAAACTGACGGCTTCATGAAG CTGATCACTCGTAAAGAAGACGGTCTTGTAATCGGTGCGCAAATTGCCGGCGCAAGCGCTTCTGACATGATTTCTGAATT GAGCCTGGCGATCGAAGGCGGAATGACTGCTGAAGATATCGCAATGACAATTCACGCTCACCCGACATTGGGCGAAATCA CTATGGAAGCGGCCGAAGTAGCAATCGGAAGCCCGATCCATATCGTAAAATAA Protein sequence : MVVGDFPIETDTLVIGAGPGGYVAAIRAAQLGQKVTVVEKATLGGVCLNVGCIPSKALINAGHRYENAKHSDDMGITAEN VTVDFTKVQEWKASVVNKLTGGVAGLLKGNKVDVIKGEAYFVDSNSVRVMDENSAQTYTFKNAIIATGSRPIELPNFKYS ERVLNSTGALALKEIPKKLVVIGGGYIGTELGTAYANFGTELVILEGGDEILPGFEKQMSSLVTRRLKKKGNVEIHTSAM AKGVEERPDGVTVTFEVKGEEKTVDADYVLITVGRRPNTDELGLEQVGIEMTDRGVIKTDKQCRTNVPNIYAIGDIIDGP PLAHKASYEGKIAAEAISGEPAEIDYLGIPAVVFSEPELASVGYTEAQAKEEGIEVVAAKFPFAANGRALSLNETDGFMK LITRKEDGLVIGAQIAGASASDMISELSLAIEGGMTAEDIAMTIHAHPTLGEITMEAAEVAIGSPIHIVK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SE0077 | NP_763632.1 | dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase E3 | Not tested | SCCpbp4 | Protein | 5e-114 | 51 |
