Gene Information

Name : ykcC (RBAM_012740)
Accession : YP_001420868.1
Strain : Bacillus amyloliquefaciens FZB42
Genome accession: NC_009725
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0463
EC number : 2.-.-.-
Position : 1236118 - 1237089 bp
Length : 972 bp
Strand : +
Note : glycosyl transferase YkcC

DNA sequence :
ATGAGCAGACATATTCAATATTCAATAGTCGTCCCGGTTTATAACGAGGAACTCGTCATTCAGACAACCTATCAGCGCCT
GAAAGAAGTCATGGATCAAACAAAAGAGCATTATGAATTGATCTTTGTCAATGATGGAAGCAAAGACCGCAGTATTGAGA
TTTTAAGAGAGCACAGTCTGATTGATCCGAGAGTGAAAATTATTGACTTTTCCAGAAACTTCGGACATCAAATCGCGATC
ACAGCGGGTATGGATTATGCAGAGGGGAATGCAATCGCCGTCATTGACGCCGATTTGCAGGACCCTCCTGAATTAATCCT
TGATATGATTGAGCAGTGGAAAGAAGGCTACGATGTGGTGTACGCCGTCAGAACGAAACGAAAGGGAGAAACCTTTTTCA
AGAAACAGACGGCCTCTATGTTTTACCGGCTGCTGCGGAGCGTGACTGATATTGATATTCCGCTCGACACCGGAGATTTC
CGCCTGCTGGACAGAAAAGTCTGTGATGAGATGAAAAGATTAAAAGAAAAAAATCCTTTTGTCAGAGGACTCGTCAGCTG
GGTCGGCTTTAAGCAGACTGCTGTAGAATATGAACGTGATGAGCGGCTTGCGGGGGAAACGAAATACCCGCTTAAAAAAA
TGCTGAAGCTTTCCATGGACGGGATCACAACGTTCTCTCATAAACCGCTCAAGGCGGCAAGCTATGCGGGAATGATCATG
TCGGGAGCGGGTTTTCTCTATATGTTTATCGTTTTATACATGAAGCTGTTTACGAACAGCACCATTACGGGCTGGTCCTC
TCTGATTGTGATACAGCTGTTATTCAGCGGCATCGTTCTATTAATGCTCGGAATGATCGGCGAATATATCGGAAGGATTT
ATGACGAAGCAAAAGACCGTCCGCTCTATATCGTGCAAAAAGCGTACGGCATGAAAAACGAAAAGATTTATCGGGACCAG
CATATGTCTTAA

Protein sequence :
MSRHIQYSIVVPVYNEELVIQTTYQRLKEVMDQTKEHYELIFVNDGSKDRSIEILREHSLIDPRVKIIDFSRNFGHQIAI
TAGMDYAEGNAIAVIDADLQDPPELILDMIEQWKEGYDVVYAVRTKRKGETFFKKQTASMFYRLLRSVTDIDIPLDTGDF
RLLDRKVCDEMKRLKEKNPFVRGLVSWVGFKQTAVEYERDERLAGETKYPLKKMLKLSMDGITTFSHKPLKAASYAGMIM
SGAGFLYMFIVLYMKLFTNSTITGWSSLIVIQLLFSGIVLLMLGMIGEYIGRIYDEAKDRPLYIVQKAYGMKNEKIYRDQ
HMS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ESA_03027 YP_001439092.1 hypothetical protein Not tested Not named Protein 2e-54 42
gtrBI AAF09026.1 GtrBI Not tested SHI-O Protein 3e-53 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ykcC YP_001420868.1 hypothetical protein VFG0670 Protein 6e-54 42