Gene Information

Name : yjcJ (RBAM_011940)
Accession : YP_001420789.1
Strain : Bacillus amyloliquefaciens FZB42
Genome accession: NC_009725
Putative virulence/resistance : Unknown
Product : cystathionine beta-lyase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0626
EC number : 4.4.1.8
Position : 1162820 - 1163995 bp
Length : 1176 bp
Strand : +
Note : catalyzes the formation of L-homocysteine from cystathionine

DNA sequence :
ATGAGTAATCACAATTGGACGCTGGAAACCCAGCTCGTGCACAATCCATTTAAAACAGACGGAGCTACCGGAGCCGTCAG
CGTCCCGATCCAGCATGCTTCCACATTCCATCAGTCTTCATTTGAAGAATTCGGGACATATGACTACAGCCGCTCAGGCA
CACCGACAAGAACAGCGCTTGAAGAAACGATCGCAGGTCTTGAAGGCGGAACGAGAGGCTTTGCTTTCAGCTCGGGAATG
GCGGCGATTTCGACGGCATTTCTGCTCTTATCCCAAGGCGACCATGTCCTTGTCACGGAGGATGTGTACGGCGGAACATT
CCGCATGGTGACTGAGGTTCTGTCCCGTTTCGGGATCGAACATACCTTTGTCGATATGACGGACACAGAAGCGGTCGCCC
GCGCCATCCGGCCGAATACGAAAGCCATCTATATGGAAACACCGTCAAACCCGACGCTCGGCATCACGGATATTAAGGGC
GTCGTCAAACTGGCAAAGGATCACGGCTGTCTGACATACCTTGACAATACTTTTATGACGCCTGCTCTGCAGCGGCCGCT
TGATCTCGGCGTAGATATCGTGCTTCACAGTGCGACGAAATTTTTAAGCGGCCACAGCGACGTGCTGTCAGGCCTTGCCG
CCGTAAAAGATGAAGAGCTCGGCAATCAGCTGTATAAGCTGCAAAACTCATTTGGAGCGGTGCTCGGCGTTCAGGACTGC
TGGCTCGTATTGAGAGGCTTAAAAACATTGCAGGTCAGACTGGAAAAAGCGAGCCGGACGGCTGAGCGGCTGTCTGCCTA
TTTTGACGGACATCCCGCCATCAAAAACGTTTACTATCCCGGCCTTGCAGGACACCCGGGAGCCGATACCCATAAACGGC
AAGCGAGCGGAGCGGGCGCCGTCCTGTCCTTTGAATTGGAAAGCAAAGAAGCCGTCAAAAAGCTGGTCGAAAACGTATCG
CTTCCGGTATTTGCCGTCAGCCTCGGCGCCGTCGAATCCATTCTCTCATACCCTGCAGCCATGTCGCATGCCGCCATGCC
AAAAGCAGAGAGGGAGAAACGCGGCATCACAGACGGCCTTCTGCGCTTGAGCGTCGGAGTCGAAAACGCCGAAGATTTAG
AGCGGGACTTCGAACAGGCATTGAAAAAAATAACCCCCGCCCAAGTGAGATCATAA

Protein sequence :
MSNHNWTLETQLVHNPFKTDGATGAVSVPIQHASTFHQSSFEEFGTYDYSRSGTPTRTALEETIAGLEGGTRGFAFSSGM
AAISTAFLLLSQGDHVLVTEDVYGGTFRMVTEVLSRFGIEHTFVDMTDTEAVARAIRPNTKAIYMETPSNPTLGITDIKG
VVKLAKDHGCLTYLDNTFMTPALQRPLDLGVDIVLHSATKFLSGHSDVLSGLAAVKDEELGNQLYKLQNSFGAVLGVQDC
WLVLRGLKTLQVRLEKASRTAERLSAYFDGHPAIKNVYYPGLAGHPGADTHKRQASGAGAVLSFELESKEAVKKLVENVS
LPVFAVSLGAVESILSYPAAMSHAAMPKAEREKRGITDGLLRLSVGVENAEDLERDFEQALKKITPAQVRS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 1e-85 53
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 1e-87 50
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 2e-86 49