Gene Information

Name : Xaut_0683 (Xaut_0683)
Accession : YP_001415592.1
Strain : Xanthobacter autotrophicus Py2
Genome accession: NC_009720
Putative virulence/resistance : Unknown
Product : integrase catalytic subunit
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 772896 - 773771 bp
Length : 876 bp
Strand : -
Note : PFAM: Integrase catalytic region; KEGG: gbe:GbCGDNIH1_1790 transposase

DNA sequence :
GTGAAGTACGCGTTCATCGCCGAGCATCGCCTTCTGTTTTCGATCCGTGCCATGTGTCGGTGCCTGCGTGTCCAGCCTAG
CGGCTTCTACGCTTGGCTGAAGGACCCGCTGAGCAAGCGCGCGCAGGAAGACCAGCGACAGACCGAGCTGATCCGCGCGG
CATGGAGCGAGAGCGGCAAGGTCTATGGCTATCGCAAGCTTCACGACGATCTGGCGGACATGGGCGAGAGCTGCTGCCCC
AACCGGGTTGCGCGGCTGACGCGGCTTGCCGGCATCCGGGCGCAGATCGGCTACAGGCGGCGCCCCGGCCAATATGGAGG
CAAGCCATCCCTGGCGGTCGACAACACGCTCGATCGCCGGTTTGACGCGGAGGCGCCTGACAAGGCCTGGGTGACCGACA
TCACCTACATCCGCACCCACGAAGGCTTCGCCTATCTGGCGGTCGTGATCGACCTCTTCTCCCGCCGCGTCGTCGGCTGG
TCCATGCAGGCCCGGCAGACGACCAACGTCGTGCTTCAGGCGCTGCTGGCCGCCGTCTGGCGACGCAAGCCGAAGGGCCG
TGTGCTGGTGCATTCGGATCAGGGGAGCCAGTTCACCAGCATGGAGTGGGCTTCGTTCCTGAAACACCACGATCTGCAGC
CCTCGATGAGCCGTCGCGGGAACTGCCATGACAACGCTGTGGCCGAGAGCTTCTTCAACCTGCTCAAGCGCGAGCGCATC
CGCCGCAAGGTCTACCGCACGCGAGACGAGGCACGCCGGGACGTGTTCGATTACATCGAGATGTTCTACAACCCCACCCG
CAAACACGCACGCAACGGGATGCTGTCGCCCATCGAGTTCGAACGGCAGCACAAAGCGACCCCCGAAGGCGTCTAG

Protein sequence :
MKYAFIAEHRLLFSIRAMCRCLRVQPSGFYAWLKDPLSKRAQEDQRQTELIRAAWSESGKVYGYRKLHDDLADMGESCCP
NRVARLTRLAGIRAQIGYRRRPGQYGGKPSLAVDNTLDRRFDAEAPDKAWVTDITYIRTHEGFAYLAVVIDLFSRRVVGW
SMQARQTTNVVLQALLAAVWRRKPKGRVLVHSDQGSQFTSMEWASFLKHHDLQPSMSRRGNCHDNAVAESFFNLLKRERI
RRKVYRTRDEARRDVFDYIEMFYNPTRKHARNGMLSPIEFERQHKATPEGV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL57581.1 transposase 1 Not tested LEE Protein 7e-45 44
unnamed AAL57519.1 transposase 1 Not tested LEE Protein 3e-45 44
ECO111_3732 YP_003236068.1 putative IS3 transposase InsF Not tested LEE Protein 2e-44 43
insF CAC43414.1 transposase of insertion element IS3 Not tested PAI III 536 Protein 2e-46 42
trp1329B CAB46576.1 IS1329 transposase B Not tested HPI Protein 2e-35 42
tnpB CAB61574.1 transposase B Not tested HPI Protein 1e-34 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Xaut_0683 YP_001415592.1 integrase catalytic subunit VFG1631 Protein 9e-47 42