Gene Information

Name : Xaut_0653 (Xaut_0653)
Accession : YP_001415563.1
Strain : Xanthobacter autotrophicus Py2
Genome accession: NC_009720
Putative virulence/resistance : Resistance
Product : peptidase M15D vanX D-ala-D-ala dipeptidase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG2173
EC number : -
Position : 734510 - 735307 bp
Length : 798 bp
Strand : +
Note : PFAM: peptidase M15D vanX D-ala-D-ala dipeptidase; KEGG: sfu:Sfum_0509 peptidase M15D, VanX D-ala-D-ala dipeptidase

DNA sequence :
GTGCTGTGCACAAGCAGGGACACACCCGCCCTCCCGCCGGTTTTCTTCGGCGCGGGACGCTCATATGATTGCGCACCATC
TCCCGCGATCCGCGCCATGCCCTCTTTCCTGATGGACCGACTGGTGAAGCCCGCTGCCCTTGCCTTGAGCATCGCCGGCC
TGCCGCTGGCGGCCGATGCCCGCACCGACCGTCCGGCCCTGTTCGTGGACGTGGCCACGCTGGTGCCGGACGCCGTGTTC
GACGTGCGTTATTTCAGCTCGGACAATTTCGTCGGCACGCGGGTGGACGGCTACGGCGCCGCGCGCTGCTTCCTCACCCG
CCCGGCCGCCGAAGCGCTGGCCGCCGTGGCGGCGGAGGCGAAGGCCGCCGGGCTTGGCCTGCGCCTGTTCGATTGCTACC
GCCCCGCCCGCGCGGTGGCGCACTTTGCCCGCTGGGCCAGCGATCTCGCCGACACCCGCACCAAGGCCGCCTTCTATCCC
GACGTGGACAAGAAGGACCTGTTCGCCGAAGGCTATATCGCCGCCCGCTCCGGCCACTCGCGCGGCTCGACCCTGGACCT
GACCCTGTTCGATCGCGCCACCGGGGCCGATCTCGACATGGGCACCCCCTTCGACCTGTTCAGCCCGCGCTCGTGGCCGG
GCTCGGATGCGGTGACGAGGGCGCAGAAGGCCAATCGCGACCGGCTCGCCGGCTTCATGGCGCGGCACGGCTTCCAGCCG
TTCGACAAGGAATGGTGGCACTTCACCCTGAAGGCCGAACCCTTCCCCGACACCTATTTCGATTTCCCCATCGAATAG

Protein sequence :
MLCTSRDTPALPPVFFGAGRSYDCAPSPAIRAMPSFLMDRLVKPAALALSIAGLPLAADARTDRPALFVDVATLVPDAVF
DVRYFSSDNFVGTRVDGYGAARCFLTRPAAEALAAVAAEAKAAGLGLRLFDCYRPARAVAHFARWASDLADTRTKAAFYP
DVDKKDLFAEGYIAARSGHSRGSTLDLTLFDRATGADLDMGTPFDLFSPRSWPGSDAVTRAQKANRDRLAGFMARHGFQP
FDKEWWHFTLKAEPFPDTYFDFPIE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
vanXB YP_008394260.1 D-alanyl-D-alanine dipeptidase Not tested Not named Protein 6e-33 42
vanX NP_815950.1 D-alanyl-D-alanine dipeptidase Not tested Not named Protein 1e-33 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Xaut_0653 YP_001415563.1 peptidase M15D vanX D-ala-D-ala dipeptidase U82965.2.orf32.gene. Protein 1e-36 47
Xaut_0653 YP_001415563.1 peptidase M15D vanX D-ala-D-ala dipeptidase AF155139.2.orf6.gene Protein 1e-33 43
Xaut_0653 YP_001415563.1 peptidase M15D vanX D-ala-D-ala dipeptidase AF310956.2.orf6.gene Protein 3e-33 42
Xaut_0653 YP_001415563.1 peptidase M15D vanX D-ala-D-ala dipeptidase U35369.1.gene7.p01 Protein 8e-34 42
Xaut_0653 YP_001415563.1 peptidase M15D vanX D-ala-D-ala dipeptidase AE016830.1.gene2249. Protein 6e-34 42
Xaut_0653 YP_001415563.1 peptidase M15D vanX D-ala-D-ala dipeptidase AF130997.1.orf5.gene Protein 6e-31 41