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Name : Xaut_4404 (Xaut_4404) Accession : YP_001419282.1 Strain : Xanthobacter autotrophicus Py2 Genome accession: NC_009720 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 4884516 - 4885922 bp Length : 1407 bp Strand : - Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGCACGATATCAAATGGATCCGGGACGAGCCGGTAGGGCTCATCACCGCGCTGGTGCGGCGCGGCGGCGGGTCCGATGA GGCGAAGTCGGCGGCCGAAAAGCTGGTCGCGTATCTGATCGGCCTTGATGAACAACGGCGCAGGACGCTGACTGACCTCG AAGGCAAGCTGGCCCGTCGTAACGCGGCCTCGAAGGAGATTGGCCAGGCGAAAGCCCAGAAGGATGAGGAGCGGGCGTCG CGCCTGATGGCTGAGGTCGCGAATTTGAAGGCTGATATTCCAACGCTTGAAGCGCTGGCGAAGGACTGGGAAAAATCTCT CGATAACGCTCTCGCCGCCATCCCCAACGCCCCGCTCGCCGAGGTGCCGCCGGGCGCCGACGAGCACGACAATGTGGAGA AGAGCCGCTTCGGCGTGGCGCGCTCCTACGCCTTCACCCCGAAGCAGCATTTCGAGGTGGGTGAAGCTCTCGGCCAGATG GATTTCGAGACCGCCGCCAAGCTCTCCGGCGCCCGCTTCGTGGTGAACAAGGGGCCCCTGGCCCGGCTGGAGCGCGCGTT GGGGCAGTTCTTCTTGGACGTGCACACCGGCGAGCATGGCTACATGGAAGTGAACCCGCCATTGCTGGTGCGGGATGATG CGATGTTTGGGACCGCGCAACTGCCAAAGTTCCGGGAGGATCAGTTCTTTGTAAATACAGTTGATGGGATTGAGGCTATA TCGGCAGAGACTAAAGGGTTTGAGACGTTTTCAGACGAGTTCAAGTCGAAATTGACTGAGGCGATGTCGTATCAGGGGCG CTGGCTCATCCCCACCGCCGAAGTCCCCCTCACCAACCTTGTCCGCGAGTCCATCCTCTCCGAGGAAGAACTGCCCCTGC GCCTCACCGCCTGCACGCCCTGCTTCCGGGCCGAGGCGGGTGCGGCGGGGCGCGATACGCGGGGCATGATCCGCCAGCAC CAGTTCACCAAGGTGGAACTGGTCTCCATCACCACGCCGGAGAAGTCGGCCGAGGAGCACGAGCGCATGCTCGCCTGCGC CGAAGCGGTGCTGAAGAAGCTCGACCTGCATTATCGCGTGGTCACGCTCTGCACTGGTGACATGGGCTTCGCCTCGCAGA AGACCTACGACATCGAGGTGTGGCTGCCGGGGCAGGGGGCGTTCCGCGAAATCTCCTCCTGCTCGGTGTGCGGCGATTTC CAGGCCCGGCGCATGAATGCCCGCTACCGCCCCGCCGAGGGGAAAGGCCCGCGCTTCGTCCATACGCTGAACGGCTCGGG CGTGGCGGTGGGCCGCGCGCTGGTGGCGGTGCTGGAAACCTACCAGCAGGAGAACGGTGCCGTCACAGTGCCGGATGCAC TCCTGCCCTATATGGGCGGGCTGAAGACCATCGAGAAGCTGAAGTAG Protein sequence : MHDIKWIRDEPVGLITALVRRGGGSDEAKSAAEKLVAYLIGLDEQRRRTLTDLEGKLARRNAASKEIGQAKAQKDEERAS RLMAEVANLKADIPTLEALAKDWEKSLDNALAAIPNAPLAEVPPGADEHDNVEKSRFGVARSYAFTPKQHFEVGEALGQM DFETAAKLSGARFVVNKGPLARLERALGQFFLDVHTGEHGYMEVNPPLLVRDDAMFGTAQLPKFREDQFFVNTVDGIEAI SAETKGFETFSDEFKSKLTEAMSYQGRWLIPTAEVPLTNLVRESILSEEELPLRLTACTPCFRAEAGAAGRDTRGMIRQH QFTKVELVSITTPEKSAEEHERMLACAEAVLKKLDLHYRVVTLCTGDMGFASQKTYDIEVWLPGQGAFREISSCSVCGDF QARRMNARYRPAEGKGPRFVHTLNGSGVAVGRALVAVLETYQQENGAVTVPDALLPYMGGLKTIEKLK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 1e-79 | 46 |
