Gene Information

Name : Xaut_3811 (Xaut_3811)
Accession : YP_001418693.1
Strain : Xanthobacter autotrophicus Py2
Genome accession: NC_009720
Putative virulence/resistance : Virulence
Product : ABC transporter-like protein
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1134
EC number : -
Position : 4225576 - 4226232 bp
Length : 657 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMb20832 putative cell surface polysaccharide export ABC-2 transporter ATP-binding protein

DNA sequence :
ATGATCGTCACCGACCGCCTCACCAAGACCTACTGGACCCACCTGCGGCGCAAGGTGGTGCTCAGCAACGTCTCCGTCAC
CCTCGATCCGCGGGTGAGCTACGGGCTGCTCGGGCAGAACGGGGCCGGCAAGTCCACCTTCCTGAAGCTGATCGCCGGCA
CCGAGGCGCCCACCTCCGGACGCATCTACCGCTCGGTGCGCCTGTCCTGGCCGCTGGGCTTTGCCGGCGGCTTTCACCCG
CAGATGACGGGGCGGGAGAACATCCGCTTTCTCGCCCGGGTCTATGATGCGGACATTGCCGAGGTGACCGATTTCGTGGA
GGATTTTTCCGAGCTGGGGCGCGACCTCGACATGCCGGTGAAGACCTATTCCTCGGGCATGACCTCGCGCCTCGCCTTTG
CGGTATCCATGGCCATCGAGTTCGATTTCTACCTGGTGGACGAGATCACGGCGGTCGGCGATTCCCGCTTCCAGCTCAAG
TGCGCGCAGGCCTTTGCCGAGCGGCGCACGCGCGCGGGCATGATCATGGCCTCCCACTCCACCGGCACCATCAAGGATTA
TTGTACCGCCGGCATGGTGTTGCAGAAGGGTCGGCTGATGATCTTCGAGGATGTGAACGACGCCATCGAGGTTCACCGCC
AGGCCATGGAGGCCTGA

Protein sequence :
MIVTDRLTKTYWTHLRRKVVLSNVSVTLDPRVSYGLLGQNGAGKSTFLKLIAGTEAPTSGRIYRSVRLSWPLGFAGGFHP
QMTGRENIRFLARVYDADIAEVTDFVEDFSELGRDLDMPVKTYSSGMTSRLAFAVSMAIEFDFYLVDEITAVGDSRFQLK
CAQAFAERRTRAGMIMASHSTGTIKDYCTAGMVLQKGRLMIFEDVNDAIEVHRQAMEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ctrD NP_273138.1 capsule polysaccharide export ATP-binding protein CtrD Not tested IHT-A Protein 7e-49 49
kpsT YP_854396.1 polysialic acid transport ATP-binding protein KpsT Not tested PAI I APEC-O1 Protein 7e-50 48
kpsT CAE85223.1 KpsT protein Virulence PAI V 536 Protein 5e-48 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Xaut_3811 YP_001418693.1 ABC transporter-like protein VFG0258 Protein 3e-49 49
Xaut_3811 YP_001418693.1 ABC transporter-like protein VFG1449 Protein 2e-50 48
Xaut_3811 YP_001418693.1 ABC transporter-like protein VFG0696 Protein 3e-46 47
Xaut_3811 YP_001418693.1 ABC transporter-like protein VFG2563 Protein 5e-49 46