Gene Information

Name : Xaut_3515 (Xaut_3515)
Accession : YP_001418401.1
Strain : Xanthobacter autotrophicus Py2
Genome accession: NC_009720
Putative virulence/resistance : Unknown
Product : thiamine biosynthesis protein ThiC
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0422
EC number : -
Position : 3914903 - 3916777 bp
Length : 1875 bp
Strand : +
Note : PFAM: thiamine biosynthesis protein ThiC; KEGG: mag:amb0221 thiamine biosynthesis protein ThiC

DNA sequence :
ATGCTGGACGAAGCCTCGACGTCCTCCCTCAAGGTCACCACCGGCGCCCTGCCGCACTCGCACAAGGTGTTCGTCTCCGC
CACCCGGCCGGACGTGCGCGTTGCGATGCGCGAGATTACCCTGTCCACGCCCGAAGAACGGCCGGTCCGGGTGTACGACA
CCTCCGGTCCCTATACCGATCCGCAAGCCGTCATCGACCTCACCAAGGGCCTGCCGCTGCTGCGCGCCCAGTGGATCCGC
GAGCGCGGCGACGTGGAAGAGGTGGACGGCCGGCAGGTCAAGCCCGAGGACAATGGCCTGAAAGACGGCCAGTCCTCCAC
CCTGCCGCAGTTCGACCTCACCGGCCGCCGGCCCCTGCGCGCCAAGGCGGGCAAGCGCCCGACCCAGATGGCCTATGCGC
GGGCCGGCATCATCACCGCCGAGATGGAATATGTGGCTGCGCGCGAGAATCTCGCCCGCGCCAATGGTGGTGTCCATCCG
CACCATCAGGCCATGGGCCTCGGCGCGGTGATCCCGTCCGACATCACGCCGGAATTCGTGCGGCAGGAAGTGGCGCGCGG
CCGCGCCATCATCCCCAACAACATCAACCACCCCGAAACCGAGCCGATGGCCATCGGCCGGAACTTCCTGGTGAAGATCA
ACGCCAACATCGGCAATTCCGCCGTCACCTCGGGCGTTGCCGAGGAGGTGGACAAGCTGGTGTGGGCCACCCGCTGGGGC
GCCGACACGGTGATGGACCTGTCGACCGGCAAGAATATCCACACCATCCGCGAATGGATCATGCGCAACTCGCCGGTGCC
AATCGGCACCGTGCCCATGTACCAGGCGCTGGAGAAGGTGAACGGCGTCGCCGAGGACCTGACCTGGGAGATCTTCCGCG
ACACGGTGATCGAGCAGGCCGAGCAGGGCGTGGACTACATGACGGTCCATGCCGGCGTGCGCCTGCCCTATATTCCGCTC
ACCGCCAACCGCGTCACCGGCATCGTGTCGCGCGGCGGCTCCATCATGGCCAAGTGGTGCCTGGCGCATCACAAGGAGAG
CTTCCTCTACGAGAATTTCGAGGAGCTTTGCGAGATCCTGGCCCAGTATGACGTGGCCTTCTCGCTGGGCGACGGCCTGC
GCCCCGGCTCCATCGCCGACGCCAACGACGCCGCCCAGTTCGCCGAACTGGAGACCCTGGGCGAATTGACCGAGATCGCC
TGGAAGTACGATTGCCAGGTGATGATCGAGGGCCCCGGCCATGTGCCGCTCCACCTCATCCGCGAGAATGTGGAGAAGCA
GCTCAAGGTCTGCCACGAGGCGCCGTTCTATACCCTCGGCCCGCTCGTGACCGACATCTCCCCCGGCTACGACCACATCT
CCTCCGCCATCGGCGCGGCGATGATCGGCTGGTTCGGCACGGCGATGCTCTGCTACGTGACCCCGAAGGAGCATCTGGGC
CTGCCGGACCGCGACGACGTGAAGGCCGGCGTCATCTCCTACAAGATCGCTGCCCACGCGGCCGATCTTGCGAAGGGGCA
TCCGGCGGCGCGCATCCGCGACGATGCGCTGTCCCGGGCGCGTTTCTCCTTCCGCTGGCGCGATCAGTTCGCGCTGTCGC
TGGACCCGGAGACGGCCGAGCGCTTCCACGACGAGACGCTTCCCGCCGAGGGCGCCAAGGTGGCGCATTTCTGCTCCATG
TGCGGGCCGAAATTCTGCTCCATGAAGATCTCGCAGGAGTTGAAGCTGGAAGCTGGCGACATTGCCCGCGCCCAGGCCGA
CAACCTCGCCTCGGCCGGCATGGCGGAGATGGCGCAGAAGTTCCGCGAAGGCGGCGGCCTCATCTACACCCCGGCCCCCG
AAGTGGCCGAGCCGCCCCCCGCCGCGGCGGAGTGA

Protein sequence :
MLDEASTSSLKVTTGALPHSHKVFVSATRPDVRVAMREITLSTPEERPVRVYDTSGPYTDPQAVIDLTKGLPLLRAQWIR
ERGDVEEVDGRQVKPEDNGLKDGQSSTLPQFDLTGRRPLRAKAGKRPTQMAYARAGIITAEMEYVAARENLARANGGVHP
HHQAMGLGAVIPSDITPEFVRQEVARGRAIIPNNINHPETEPMAIGRNFLVKINANIGNSAVTSGVAEEVDKLVWATRWG
ADTVMDLSTGKNIHTIREWIMRNSPVPIGTVPMYQALEKVNGVAEDLTWEIFRDTVIEQAEQGVDYMTVHAGVRLPYIPL
TANRVTGIVSRGGSIMAKWCLAHHKESFLYENFEELCEILAQYDVAFSLGDGLRPGSIADANDAAQFAELETLGELTEIA
WKYDCQVMIEGPGHVPLHLIRENVEKQLKVCHEAPFYTLGPLVTDISPGYDHISSAIGAAMIGWFGTAMLCYVTPKEHLG
LPDRDDVKAGVISYKIAAHAADLAKGHPAARIRDDALSRARFSFRWRDQFALSLDPETAERFHDETLPAEGAKVAHFCSM
CGPKFCSMKISQELKLEAGDIARAQADNLASAGMAEMAQKFREGGGLIYTPAPEVAEPPPAAAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00321 YP_008211647.1 Thiamine biosynthesis protein ThiC Not tested AbaR26 Protein 0.0 66
BJAB07104_00317 YP_008207782.1 Thiamine biosynthesis protein ThiC Not tested AbaR25 Protein 0.0 66
thiC YP_001598318.1 thiamine biosynthesis protein ThiC Not tested MDA Protein 0.0 64