Gene Information

Name : Xaut_3472 (Xaut_3472)
Accession : YP_001418358.1
Strain : Xanthobacter autotrophicus Py2
Genome accession: NC_009720
Putative virulence/resistance : Unknown
Product : integrase catalytic subunit
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 3865268 - 3866140 bp
Length : 873 bp
Strand : +
Note : PFAM: Integrase catalytic region; KEGG: rpa:RPA3836 integrase, catalytic domain

DNA sequence :
ATGAGCGAACGGCGGGCGTGTAAAGCCACCGGCTTCTGCCGCATGACCATGAGATACAGAGCCACGCGCGGAAATGACGC
CTCGCTGCGTGAGCGCATGAAGGCCATCGCCCAGGAGCGACGGCGGTTTGGCTACCGCCGTCTCCACGTCCTGCTCAGGC
GGGAGGGCTTCCGGGTCAACCACAAGCGGCTGTTCCGGCTCTACCGTGAGGAACGGCTGATGGTCCGCCGGCGAGGCGGT
CGCAAGCGGGCGATCGGGACACGGGCGCCGATGATGATCCCGATGGGACGGAACGAGCGCTGGTCACTCGACTTCGTCGC
CGACCAGATGACCGATGGCCGCCGCTTCCGGATGCTGGCCATCGTGGACGACTGCACCCGCGAGTGCCTGGCGCTGGTGG
CGGACACCTCGCTGTCCGGGGTCAGGGTCGCTCGCGAACTCGATCGGTTGCTGGCAGAGCGCGGCCGGCCGAAGATGATC
GTCAGCGACAATGGCAGCGAGTTCACCTCCAATGCCATTCTGGGCTGGGCCGACGCGGCTCGGGTCGAGTGGCACTCCAT
CGCGCCCGGCAAGCCGATGCAGAATGGCTTCATCGAGAGCTTCAACGGCCGCCTTCGGGACGAGCTGTTGAACGAGACGC
TGTTCTCCAGCCTGTCCCAGGCCAGGGCCGCCCTCGCCCGATGGCAGGTCGATTACAACACCGACCGACCGCACTCGAAG
CTCGAATGGCAGACGCCAAGCGCCTTCGCCTCAACGTTCCACCCGCGGCGGGATCAGACGCTCCACAACATGAGCGGCTC
CGCGTCTGCCCCCGCCGCCCCGCACACCCGAAAGGGCAAATCCAACCGCCAGAACGAACTCAAAGCTGGATAG

Protein sequence :
MSERRACKATGFCRMTMRYRATRGNDASLRERMKAIAQERRRFGYRRLHVLLRREGFRVNHKRLFRLYREERLMVRRRGG
RKRAIGTRAPMMIPMGRNERWSLDFVADQMTDGRRFRMLAIVDDCTRECLALVADTSLSGVRVARELDRLLAERGRPKMI
VSDNGSEFTSNAILGWADAARVEWHSIAPGKPMQNGFIESFNGRLRDELLNETLFSSLSQARAALARWQVDYNTDRPHSK
LEWQTPSAFASTFHPRRDQTLHNMSGSASAPAAPHTRKGKSNRQNELKAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13540.1 insertion sequence IS407 OrfB Not tested PAGI-8 Protein 1e-42 46
unnamed ABR13352.1 insertion sequence IS407 OrfB Not tested PAGI-5 Protein 2e-26 44
XCV0439 YP_362170.1 ISRSO12 transposase (fragment) Not tested Hrp PAI Protein 9e-32 42
trp1400B CAB46580.1 IS1400 transposase B Not tested HPI Protein 9e-32 41