Gene Information

Name : Xaut_3238 (Xaut_3238)
Accession : YP_001418124.1
Strain : Xanthobacter autotrophicus Py2
Genome accession: NC_009720
Putative virulence/resistance : Unknown
Product : K+-transporting ATPase subunit B
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2216
EC number : -
Position : 3591093 - 3593186 bp
Length : 2094 bp
Strand : -
Note : TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; K+-transporting ATPase, B subunit; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: rle:pRL110380 putative potassium-transporting ATP

DNA sequence :
ATGGCCAGATCCCATTCCGTAAGCCTGCTCGACCCCGCCATCCTCCTGCCCGCCGTCGGCGCCTCGTTCCGCAAGCTCGA
TCCGCGCGCGATGGTGAGGAACCCGGTCATGTTCGTGGTGGAGGTGGTCGCCCTCCTCACCACCGTGCTGTTCGTGCGCG
ACCTCGTCACCTCGGGCGGCGGCCTCGGCTTCTCCTTCCAGATCATCCTGTGGCTGTGGTTCACCGTGCTGTTCGCCAAT
TTCGCCGAAGCGGTGGCGGAGGGGCGCGGCAAGGCGCAGGCGGAATCACTGCGCCGCACCCGCACCGAGACCCAGGCCAA
GCTGCTCACCGGCGAGGGCGACGCCTTCCGCACCGTGCCCGGCACCTCACTGAAGGTCGGCGACGTGGTGCTGGTGGAGG
CCGGCGACATCATCCCCTCCGACGGCGAGGTGGTGGAAGGCGTCGCCTCGGTGAACGAGGCCGCCATCACCGGCGAGAGT
GCCCCTGTGATCCGCGAATCCGGCGGCGACCGCTCAGCGGTGACCGGCGGCACCACGGTGGTCTCCGATCATCTCAAGGT
GCGCATCACGGCGGCGGCGGGCGCGACCTTCCTCGACCGCATGATCGCGCTGGTGGAAGGCGCCGAGCGGCAGAAGACGC
CCAACGAGATCGCCCTCAACATCCTGCTCGCGGGCATGACGCTGATCTTCATCTTCGCCACCGCGTCGATCCCGAGCTTT
GCGTCCTACGCGGGCGGCTCCATCTCCGTGGTGGTGCTGGTGGCGCTGTTCGTGACCCTCATTCCCACCACTATCGGGGC
GCTGCTCTCGGCCATCGGCATCGCCGGCATGGACCGGCTGGTGCGCTTCAACGTGCTCGCCATGTCGGGCCGCGCGGTGG
AGGCGGCGGGCGACGTGGACACCCTGCTGCTCGACAAGACCGGCACCATCACGCTCGGCAACCGGCAGGCCGCCGCCTTC
CACCCGGTGCGCGGGGTGAGCGAGCAGGACCTGGCGGACGCCGCCCAGCTCGCATCGCTCGCCGACGAGACCCCCGAAGG
CCGCTCCATCGTAGTGCTCGCGAAGGAGAAATACGCCATCCGCGGCCGCGACATGGCGAGCCTGAACGCCCATTTCGTGC
CCTTCACCGCCCAGACCCGCATGAGCGGCGTGGACGTGGACGGAAGCTCCGTCCGCAAGGGCGCGGTGGATGCCATCCTG
TCTTATGTCCAGGGCGGCAGCAGCACCGTCACCGGCTCCGGCGCGGTGCAGACTGTGCGAACGCTGGTGAGCCAGGAGGC
CATCCGCGAGATCAATGCCATCGCCGAGGAGATCGCCAAGTCCGGCGGCACGCCCCTGGCGGTGGCGCGGGACGGGCGCC
TGCTCGGCGTCATCCATCTCAAGGACATCGTGAAGGGCGGCATCCGCGAGCGCTTCGCCGAATTGCGGCGCATGGGCATC
CGCACGGTGATGATCACCGGCGACAACGCGCTCACCGCCGCCGCCATCGCCGCCGAGGCGGGGGTGGACGACTTCCTCGC
CCAGGCGACCCCGGAAGCCAAGCTGCGCCTCATCCGCGATGAGCAGGCCAAGGGCAAGCTGGTGGCCATGTGCGGCGACG
GCACCAACGATGCCCCAGCGCTGGCCCAGGCCGACGTGGGGGTGGCCATGAACACCGGCACTGTGGCGGCCCGCGAGGCC
GGCAACATGGTGGACCTCGACAGCGACCCCACCAAGCTCATCGAGATCGTGGAGATCGGCAAGGCGCTGCTGATGACGCG
CGGCTCGCTCACCACCTTCTCCATCGCCAATGATGTGGCGAAGTATTTCGCCATCATCCCCGCCATGTTCGTGGCCTTCT
ACCCGCAGCTCGGCACGCTGAACGTGATGGGGCTGGCCTCGCCCCAGAGCGCCATCCTGTCGGCCATCATCTTCAACGCG
CTCATCATCATCGCCCTCATCCCGCTGGCGCTGAAGGGTGTCGCCTTCCGGCCCATCGGCGCGGCGGCGCTGCTGAAGCG
CAACCTTCTGATCTACGGCCTCGGCGGCATCCTCGTGCCGTTCGTCGGCATCAAGGCCATCGACCTTGCGGTCACGGCCC
TTCACCTGGTTTGA

Protein sequence :
MARSHSVSLLDPAILLPAVGASFRKLDPRAMVRNPVMFVVEVVALLTTVLFVRDLVTSGGGLGFSFQIILWLWFTVLFAN
FAEAVAEGRGKAQAESLRRTRTETQAKLLTGEGDAFRTVPGTSLKVGDVVLVEAGDIIPSDGEVVEGVASVNEAAITGES
APVIRESGGDRSAVTGGTTVVSDHLKVRITAAAGATFLDRMIALVEGAERQKTPNEIALNILLAGMTLIFIFATASIPSF
ASYAGGSISVVVLVALFVTLIPTTIGALLSAIGIAGMDRLVRFNVLAMSGRAVEAAGDVDTLLLDKTGTITLGNRQAAAF
HPVRGVSEQDLADAAQLASLADETPEGRSIVVLAKEKYAIRGRDMASLNAHFVPFTAQTRMSGVDVDGSSVRKGAVDAIL
SYVQGGSSTVTGSGAVQTVRTLVSQEAIREINAIAEEIAKSGGTPLAVARDGRLLGVIHLKDIVKGGIRERFAELRRMGI
RTVMITGDNALTAAAIAAEAGVDDFLAQATPEAKLRLIRDEQAKGKLVAMCGDGTNDAPALAQADVGVAMNTGTVAAREA
GNMVDLDSDPTKLIEIVEIGKALLMTRGSLTTFSIANDVAKYFAIIPAMFVAFYPQLGTLNVMGLASPQSAILSAIIFNA
LIIIALIPLALKGVAFRPIGAAALLKRNLLIYGLGGILVPFVGIKAIDLAVTALHLV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kdpB NP_814334.1 potassium-transporting ATPase subunit B Not tested Not named Protein 9e-156 60
ef0088 AAM75291.1 EF0088 Not tested Not named Protein 6e-156 60
SAR0071 YP_039539.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 9e-128 56
kdpB(SCCmec) NP_370597.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 9e-128 56
kdpB NP_373310.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 9e-128 56
kdpB YP_190029.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 9e-128 56
kdpB YP_251949.1 potassium-transporting ATPase subunit B Not tested SCCmec Protein 3e-128 56
kdpB BAA82181.1 potassium-transporting ATPase(B chanin) Not tested Type-II SCCmec Protein 7e-128 56