Gene Information

Name : Xaut_2905 (Xaut_2905)
Accession : YP_001417799.1
Strain : Xanthobacter autotrophicus Py2
Genome accession: NC_009720
Putative virulence/resistance : Unknown
Product : integrase catalytic subunit
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 3228347 - 3229207 bp
Length : 861 bp
Strand : -
Note : PFAM: Integrase catalytic region; KEGG: mlo:mlr6150 transposase

DNA sequence :
ATGAGGTTCGCCTTCATCGCGAAGCACCGGAACATCTGGCCGGTGGCATGGCTATGCGACGCTCTGGACATCTCCCGGTC
GGGCTTGCGTGCTTGGCTCAACCGCAGCCCCAGTGCGCATGCCCGACACGATGACGTGCTCGCGACGGCGATCGATCGGA
GCTTCAAGAGCAGCGATCGAACCTATGGCGCGCGACGCGTCTGGCACGATGTGCTGGCGGAAGGGTTCTCCTGCGGGCTG
CACCGGGTCGAACGGATCATGCGTGAGCATGGGTTGCGGGCCCGGCCGCGCCGTCGTGGGCTGCCGAAGGATGTCGGCGT
GCGGGCGGCCGCTTCGGACAATCTTCTCGACCGCGCCTTCGAGGCGTCGGCTCCAAACCAGAAATGGGTGGCGGACTTCA
CCTACATCTGGACCGCGGAGGGTTGGCTCTACGTTACCGCGGTCGTCGACCTGTTCTCACGACGTGTCGTCGGCTGGGCG
ATGAAGGCGGAGATGACGGCACAGCTCGTCGCCGATGCCCTCATCATGGCGGTCTGGCGCCGCGGCAAGACGGACAGCCT
GCTGCACCACAGCGACCAGGGCAGCCAATATACGAGCGAGCGGTTCCAGGGCCTGATGGCCGACCATGGCATCACCTGCT
CGATGAGCCGGTCGGGCAACGTCTGGGACAATGCGGCGATGGAGAGCTTCTTCTCGTCGCAGAAAACCGAGCGCACAGCC
CGCAAGGTCTACAGGATGAGGGATGACGCGAGAGCGGATGTGTTCGACTACATCGAGCGCTTCTACAATCGCCGACGCCG
GCACTCGACACTGGGCTACCTGAGCCCCGTCGAGTTCGAGCAGCGAGCTAAATTAGCTTAA

Protein sequence :
MRFAFIAKHRNIWPVAWLCDALDISRSGLRAWLNRSPSAHARHDDVLATAIDRSFKSSDRTYGARRVWHDVLAEGFSCGL
HRVERIMREHGLRARPRRRGLPKDVGVRAAASDNLLDRAFEASAPNQKWVADFTYIWTAEGWLYVTAVVDLFSRRVVGWA
MKAEMTAQLVADALIMAVWRRGKTDSLLHHSDQGSQYTSERFQGLMADHGITCSMSRSGNVWDNAAMESFFSSQKTERTA
RKVYRMRDDARADVFDYIERFYNRRRRHSTLGYLSPVEFEQRAKLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
trp1329B CAB46576.1 IS1329 transposase B Not tested HPI Protein 9e-37 43
tnpB CAB61574.1 transposase B Not tested HPI Protein 2e-36 43
insF CAC43414.1 transposase of insertion element IS3 Not tested PAI III 536 Protein 5e-42 42
l7094 CAD33743.1 ORF B protein Not tested PAI I 536 Protein 8e-28 42
orfB CAE85178.1 OrfB protein, IS911 Not tested PAI V 536 Protein 8e-28 42
tnpA1133 ACK44540.1 TnpA Not tested SGI1 Protein 3e-42 41
orfB AGK07032.1 IS1133 transposase; OrfB Not tested SGI1 Protein 3e-42 41
orfB AGK07090.1 IS1133 transposase; OrfB Not tested SGI1 Protein 3e-42 41
unnamed AAL57519.1 transposase 1 Not tested LEE Protein 7e-41 41
unnamed AAL57581.1 transposase 1 Not tested LEE Protein 4e-41 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Xaut_2905 YP_001417799.1 integrase catalytic subunit VFG1631 Protein 3e-42 42
Xaut_2905 YP_001417799.1 integrase catalytic subunit VFG1484 Protein 5e-28 42