Gene Information

Name : Xaut_2636 (Xaut_2636)
Accession : YP_001417535.1
Strain : Xanthobacter autotrophicus Py2
Genome accession: NC_009720
Putative virulence/resistance : Unknown
Product : ABC transporter-like protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG4172
EC number : -
Position : 2926476 - 2928119 bp
Length : 1644 bp
Strand : +
Note : PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: bra:BRADO1006 putative oligopeptide transport protein (ABC superfamily, atp_bind)

DNA sequence :
ATGACCCAGCCCCTCCTGTCCGTCGAAGACCTCTCCGTCGCCTTCCGCCGGGTCGATGATCCCAGCGGCACCGGGCAGGC
GCTGGCGGTGAAGCATGTGTCGTTCGACCTCGCCAAGGGCGAGACGTTGGCGCTGGTGGGCGAATCCGGCTCCGGCAAGT
CGGTCACCGCGCTCTCCATCCTGAAGCTGCTGAACTATCCGGCCGCCAGCCACCCGTCGGGCCGCATCCTGTTCGAGGGG
CGCGACCTGCTCACGGTTCCCGAGCGCGAGCTGCGGGGAGTGCGGGGCAACAAGATCACCATGGTGTTCCAGGAGCCCAT
GAGTTCCCTGAACCCGCTTCACACCATCGAGCAGCAGGTGGTGGAGATGCTGACCCTCCATCGCGGCATGGGCACCGCCG
CCGCGCGCGCCCGCACGCTGGAGCTTCTGGGCGAGGTGGGCATCCCCAAGCCGGAGGAGCGGCTTTCCGCCTATCCGCAC
CAATTGTCCGGCGGCCAGCGCCAGCGGGTGATGATCGCCATGGCGCTCGCCAACGAGCCGGACCTGCTCATCGCCGACGA
GCCCACCACCGCCCTAGACGTGACCGTGCAGGCGCAGATCCTGAAGCTCTTGAAGGAGCTTCAGGCCCGCCTCGGCATGG
CCATGCTGTTCATCACCCACGACCTCAACATCGTGCGCAAGATCGCCGATCGGGTGTGCGTGATGCAGCGGGGCGAGATC
GTGGAGCAGGGCGGGGCGGAGGAAACCTTCCTCCATCCGCGCCACCCCTACACCCAGGCGCTGCTGAAGGCCGAGCCGAA
GCCCGATCCTGCCCCCGTCGTCCCCGACGCGCCCATCGTGGTGGAAACCACCGACCTCAAGGTGCACTTCCCTATCAAGC
GCGGCATCCTGCGCAAGACGGTGGGCTACGTGAAGGCGGTGGACGGCGTCTCCGTCGCCATCCGCCGGGGCGAGACGCTG
GGGGTGGTGGGGGAATCCGGCTCCGGCAAGACCACGCTGGGCCTTGCCCTGCTGCGCCTCATCTCCAGCCAGGGGCCGGT
GGCCTTCCTCGGCCAGCGCATCGACGGCCTGTCCTTCAAGGCCATGCGGCCGCTGCGGTCTGACATGCAGATCGTGTTCC
AGGATCCCTATGGGGCGCTCTCCCCGCGCATGTCGGTGAGCGATATCGTGGGGGAGGGGCTGCTGGTCCACCAGCGCGGC
CTGTCCGCCGAGGCGCGGGAGGCACGGGTGGTGGCGGCCTTGGAAGACGTGGGCCTCGATCCGGAGAGCCGGCACCGCTA
TCCCCACGAGTTCTCCGGCGGCCAGCGCCAGCGCATCTCGATTGCCCGCGCCATGGCGCTGGAACCCTCCTTCGTGGTGC
TGGACGAGCCCACCAGCGCCCTCGACATGATCGTGCAGGCACAGATCGTAGACCTGCTGCGCGCGCTCCAGCGCAAGCGC
GACCTCACCTTCATGTTCATCTCCCACGATTTGCGGGTGGTCTCGGCGCTGGCGAGCCGCATCCTGGTCATGCGCGACGG
CAAGATGGTGGAGGAGGGCGAGGCGCGCGCCGTGTTCGAGCAGCCGAAGGAGGCCTATACGCGGGCCCTGTTCGCCGCCG
CCTTCAATCTGGAGATCGCCGGCCAGGGCGTGGTCCGCCAATGA

Protein sequence :
MTQPLLSVEDLSVAFRRVDDPSGTGQALAVKHVSFDLAKGETLALVGESGSGKSVTALSILKLLNYPAASHPSGRILFEG
RDLLTVPERELRGVRGNKITMVFQEPMSSLNPLHTIEQQVVEMLTLHRGMGTAAARARTLELLGEVGIPKPEERLSAYPH
QLSGGQRQRVMIAMALANEPDLLIADEPTTALDVTVQAQILKLLKELQARLGMAMLFITHDLNIVRKIADRVCVMQRGEI
VEQGGAEETFLHPRHPYTQALLKAEPKPDPAPVVPDAPIVVETTDLKVHFPIKRGILRKTVGYVKAVDGVSVAIRRGETL
GVVGESGSGKTTLGLALLRLISSQGPVAFLGQRIDGLSFKAMRPLRSDMQIVFQDPYGALSPRMSVSDIVGEGLLVHQRG
LSAEAREARVVAALEDVGLDPESRHRYPHEFSGGQRQRISIARAMALEPSFVVLDEPTSALDMIVQAQIVDLLRALQRKR
DLTFMFISHDLRVVSALASRILVMRDGKMVEEGEARAVFEQPKEAYTRALFAAAFNLEIAGQGVVRQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 6e-78 42
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 6e-78 42
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 6e-78 42
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 6e-78 42
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 2e-86 42