Gene Information

Name : Xaut_2348 (Xaut_2348)
Accession : YP_001417248.1
Strain : Xanthobacter autotrophicus Py2
Genome accession: NC_009720
Putative virulence/resistance : Unknown
Product : short-chain dehydrogenase/reductase SDR
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1028
EC number : -
Position : 2622178 - 2623023 bp
Length : 846 bp
Strand : +
Note : PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: swi:Swit_1480 short-chain dehydrogenase/reductase SDR

DNA sequence :
ATGAAACACAGGCGCCCTACCGAAGAGCCGGACAACGGTCCTCGCGCTGGTGAGAGAAACGATCCAGAGACGCATCCCAT
GGATTTTCGTGTTTCGCTCGACGGTCGCTCCGCCTTGGTGACGGGCGCGTCCGGAGGTCTGGGGGCCTTTTTTGCCGAGC
GTCTGGCGGCTGCCGGGGCGCGCGTGGCCGTCGCCGCGCGCCGGCGTGATGCCTGTGCCGACCTGTGCGCCCGCATCGAG
GCCACCGGCGGCACGGCGCTGCCCATCGCTCTCGACGTGAGCGACGAGGCTTCGGCCGCGGCGGCGGTGGCCGAGGTGGC
GGCGGCGTTCGGCGGCCTCGACATCCTGGTCAACAATGCGGGTGTGACCGGCACCACGCCGCTCCTGGACGAGACCGCCG
AGGCGTGGGACCGCATCCTCGACACCAATCTGAAGGGTGGCTTCCTAGTGGGCCGGGAAGCTGCGCGCGCCATGGCGAAG
ACCGGGCGCGGCGGGCGCATCGTCAATGTGGCCTCCATCCTCGGGCTGCGCATCGCCGGGCAGGTGGCGGCCTATGCGGC
CTCCAAGGCGGCCCTGGTGCAGCTGACCAGGTCCATGGCGCTGGAATGGGCGCGCTATTCCATCCAGGCCAATGCGCTCT
GCCCCGGCTATGTGGAAACCGATCTCAACCGCGACTTCTTCGCGAGCCCGGCGGGCGAGGCGCTGATCAAGCGCATCCCC
TCCCGCCGTCTCGGCCGCCTCGAGGATCTCGAGGGCCCGCTCCTGTTCCTGTGTTCCGACGCCGCCCGCTACGTGACCGG
GACGACGCTGGTGGTCGATGGCGGCCATCTGGTCTCATCCCTGTGA

Protein sequence :
MKHRRPTEEPDNGPRAGERNDPETHPMDFRVSLDGRSALVTGASGGLGAFFAERLAAAGARVAVAARRRDACADLCARIE
ATGGTALPIALDVSDEASAAAAVAEVAAAFGGLDILVNNAGVTGTTPLLDETAEAWDRILDTNLKGGFLVGREAARAMAK
TGRGGRIVNVASILGLRIAGQVAAYAASKAALVQLTRSMALEWARYSIQANALCPGYVETDLNRDFFASPAGEALIKRIP
SRRLGRLEDLEGPLLFLCSDAARYVTGTTLVVDGGHLVSSL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK01499.1 2-deoxy-D-gluconate 3-dehydrogenase Not tested PAGI-1 Protein 1e-30 55