Gene Information

Name : Xaut_2254 (Xaut_2254)
Accession : YP_001417154.1
Strain : Xanthobacter autotrophicus Py2
Genome accession: NC_009720
Putative virulence/resistance : Unknown
Product : transposase IS66
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3436
EC number : -
Position : 2514453 - 2516069 bp
Length : 1617 bp
Strand : +
Note : PFAM: transposase IS66; KEGG: ret:RHE_PA00101 putative insertion sequence transposase protein, IS66 family

DNA sequence :
ATGAGCCCGCCCGCCGCATCGCCCGTTCTGCCTGCCGATCTGGCGGCGGCGCATGCGATGATCCTGGCCGAGCGCGCCAG
GCGGATCGAGGCCGAGGCCGCAGCCTCCGGCGTCGAGGCCATGATCGCCCACCTCAAGCTGACGATCGAGAAGCTCAGGC
GCGAGCTTTACGGCCAGCGCTCCGAGCGCACGGTGCGGCTCATCGACCAGATGGAACTCCAGCTCGAGGAACTGGAGGCC
AGGGCGAGCGAGGACGAGATCGCGGCACAGGAGAGTGCGCGCCTGGCGTCACTGCCGGCGCCCGCGCCACGCCGTCGGCC
CGTGCGCAAGCCCTTCCCCGAGCACCTGCCGCGCGAGCGCGTCGTCGTGCCGGCGCCGACCAGCTGTCCCTGCTGCGGCT
CGATGAAGCTGTCGAAGCTTGGAGAGGACGTCACCGAGACTCTGGAGATCGTGCCGCGCTCCTGGAAGGTGATCCAGACG
GTCCGCGAGAAGTTCACCTGCCGCCAGTGCGAGGCGATCACCCAGCCGCCGGCGCCCTTCCATGTGACGCCGCGCGCCTT
CATGGGACCGCACCTGCTGGCGACAATCCTCTTCGAGAAGTTCGGGCAGCATCAGCCCTTGAACCGCCAGAGCGAACGCT
ACGGCCGCGAGGGTATCGACCTCTCCGTCTCGACGCTGGCCGATCAGGTCGGTACGGCGACTGCAGCTCTGAGGCCTCTG
CATGATCTGATTGCCCGGCACGTCATGGCGGCAGAGCGGCTGCATGCCGACGACACCACCGTGCCGATCCTGGCCAAGGG
GAAGACCGATACGGGCCGGATCTGGACCTATGTGCGCGACGACCGCCCCTTCGGCGGTGCCGACCCGCCGGCGGCCCTAT
ACTTCGCCTCGCGCGACAGGCGGCAGGCGCATCCGGATGCGCACCTCGCGGGCTGGCGGGGCATCCTCCAGGCCGACGCC
TATGGCGGGTACAACGGCCTGTATGATCCCGCGCGTCCGGGCGGACCGGTCACGTCGGCGCTTTGCTGGTCCCATGCCAG
AAGAGGCTTCTTCGAACTCGCAGACATCGCCGCGAGCGCGCGGCGCGGGCCCGGCGCCGCACCGGTGTCGCCCATCGCCA
TGGAGGCGGTGAAGCGCATCGACGCTCTTTTCGAGATCGAACGCGGGATCAACGGCTTGAGCGCTAAGGAACGCCGGGAC
GCCCGGCAGGCGCAGAGCCGGCCGCTCGTCGATGACCTGCACGCCTGGCTCGGCGAGCAGCGCCTCAAGCTGACCCGCTC
GGCCTCGGTTGCCAAGCCGATCGACTACATGCTCAGGCGCTGGGATGGCTTTGCAACCGTCCTCGATGACGGCCGTGCCT
GCCTGTCGAACAATGCAGCGGAGCGCGCCCTGCGCGGCTTCGCTCTGGGACGGAAGGCATGGCTCTTCGCCGGCTCCGAC
CGCGGCGCCGAGCGCGCCGCCGCCATGGCGACGCTGATCACCACGGCGAAGCTCAACACCGTCGATCCGCAAGCCTGGCT
CGCCGATGTACTCGCCCGCATCGCGGGCACGCCGCAGAGCCGGCTCGCGGAACTGTTGCCATGGAGCTGGCAAATGCGAA
GCTGCCGGACGCCATAG

Protein sequence :
MSPPAASPVLPADLAAAHAMILAERARRIEAEAAASGVEAMIAHLKLTIEKLRRELYGQRSERTVRLIDQMELQLEELEA
RASEDEIAAQESARLASLPAPAPRRRPVRKPFPEHLPRERVVVPAPTSCPCCGSMKLSKLGEDVTETLEIVPRSWKVIQT
VREKFTCRQCEAITQPPAPFHVTPRAFMGPHLLATILFEKFGQHQPLNRQSERYGREGIDLSVSTLADQVGTATAALRPL
HDLIARHVMAAERLHADDTTVPILAKGKTDTGRIWTYVRDDRPFGGADPPAALYFASRDRRQAHPDAHLAGWRGILQADA
YGGYNGLYDPARPGGPVTSALCWSHARRGFFELADIAASARRGPGAAPVSPIAMEAVKRIDALFEIERGINGLSAKERRD
ARQAQSRPLVDDLHAWLGEQRLKLTRSASVAKPIDYMLRRWDGFATVLDDGRACLSNNAAERALRGFALGRKAWLFAGSD
RGAERAAAMATLITTAKLNTVDPQAWLADVLARIAGTPQSRLAELLPWSWQMRSCRTP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
st57 CAC81895.1 ST57 protein Not tested LEE II Protein 1e-81 44
tnp AEA34686.1 transposase Not tested Not named Protein 2e-85 44
Z4337 NP_289562.1 hypothetical protein Not tested OI-122 Protein 1e-85 44
unnamed CAC39285.1 hypothetical protein Not tested LPA Protein 9e-86 44
Z5098 NP_290249.1 prophage-associated protein Not tested LEE Protein 1e-85 44
unnamed AAC31494.1 L0015 Not tested LEE Protein 8e-86 44
ECs4547 NP_312574.1 hypothetical protein Not tested LEE Protein 5e-86 44
unnamed ACU09439.1 IS66 family element transposase Not tested LEE Protein 4e-86 44
Z1131 NP_286666.1 hypothetical protein Not tested TAI Protein 8e-85 44
Z1570 NP_287074.1 hypothetical protein Not tested TAI Protein 8e-85 44
BCAM0248 YP_002232880.1 putative transposase Not tested BcenGI11 Protein 1e-85 44
unnamed CAI43806.1 hypothetical protein Not tested LEE Protein 3e-85 44
unnamed AAL57570.1 unknown Not tested LEE Protein 7e-86 44
unnamed AAL08460.1 unknown Not tested SRL Protein 1e-62 43
Z1161 NP_286696.1 hypothetical protein Not tested TAI Protein 6e-82 42
Z1600 NP_287104.1 hypothetical protein Not tested TAI Protein 6e-82 42
tnp AEA34687.1 IS66 family transposase Not tested Not named Protein 3e-60 42
Z4340 NP_289564.1 hypothetical protein Not tested OI-122 Protein 7e-77 41
aec53 AAW51736.1 Aec53 Not tested AGI-3 Protein 2e-80 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Xaut_2254 YP_001417154.1 transposase IS66 VFG0793 Protein 5e-86 44
Xaut_2254 YP_001417154.1 transposase IS66 VFG1051 Protein 8e-63 43