Gene Information

Name : Xaut_1902 (Xaut_1902)
Accession : YP_001416804.1
Strain : Xanthobacter autotrophicus Py2
Genome accession: NC_009720
Putative virulence/resistance : Virulence
Product : ATPase
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 2143124 - 2145763 bp
Length : 2640 bp
Strand : +
Note : PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: rpe:RPE_4337 ATPase AAA-2 domain protein

DNA sequence :
ATGAATTTTGAGATCTATACCGAGCGCGCGCGCGGCTTCGTCCAGTCGGCCCAGTCGCTGGCGACCCGGGAGGGTAACCA
GCAGTTCACGCCCGAGCACCTGCTCAAGGTGCTGATGGACGATCCCGAAGGCCTGTGCTCGGGCCTGATCCAGCGCGCGG
GCGGCAATCTCGTGCTGGTGCGGGCCGAGGTCGAAGCGGCGCTGAAGAAGCTGCCGAAGGTGGAAGGCGGCTCCGGCCAG
GTCTATCTCAGCCAGCAGCTGGCCAAGGTGTTCGAGACCGCCGAGCAGGCGGCCAAGAAGGCGGGCGACGGCTATGTCAC
CGTCGAGCGGATGCTGCTCGCCCTGACCATCGAGAAGGACACCGAGGCGGGCCGCATCCTGGTGAAGGCCGGCGTGACGC
CGCAGACCCTGAATGCGGCCATCGAGGCCCTGCGCAAGGGCCGCACTGCGGACAGCGCTACCGCCGAGAATGCCTATGAC
GCCCTGAAGAAATACGCCCGCGACCTCACCCAGGCCGTGCGGGACGGCAAGCTCGACCCGGTCATTGGCCGCGACGAGGA
GATCCGCCGCACCATCCAGGTGCTGGCGCGCCGCACCAAGAACAATCCCGTGCTCATCGGCGAGCCCGGTGTCGGCAAGA
CCGCCATCGTGGAGGGCCTTGCCCGCCGCATCGTGGACGGCGACGTGCCGGAGAGCCTGAAGAACAAGAGCCTGCTGGCC
CTCGACATGGGCTCCCTCATCGCCGGCGCGAAATATCGCGGCGAGTTCGAGGAGCGCCTGAAGAGCGTGCTCTCCGAGGT
GGAGAGCGCGGAAGGCGGCATCATCCTGTTCATCGACGAGATGCACACCCTGGTCGGCGCCGGCAAGACCGACGGCGCCA
TGGATGCCTCCAACCTCTTGAAGCCGGCGCTGGCCCGCGGCGAGCTGCACTGCGTCGGCGCGACCACGCTGGATGAATAT
CGCAAGCACGTGGAGAAGGACGCAGCCCTGGCCCGTCGCTTCCAGCCCGTCTTCGTCTCCGAGCCCACGGTGGAGGATAC
CGTCTCCATCCTGCGCGGGCTGAAGGAGAAGTACGAGCTGCACCACGGCGTGCGCATCACCGATTCGGCGCTGGTGTCGG
CGGCGGTCCTGTCCAACCGCTACATCACCGACCGCTTCCTGCCCGACAAGGCCATCGACCTGATGGACGAGGCGGCTTCC
CGCCTGCGCATGCAGGTGGATTCGAAGCCCGAGGAGCTGGACAGTCTCGATCGCGAGATCATGCGCCGCAAGATCGAGCA
GGAGGCCCTCAAGAAGGAGACCGACACCGCCTCCAAGGACCGCCTGAAGCGGTCCGAGAAGGAGTTGGCCGACCTTGAGG
AGAAGGCTTCCGTCCTCACCTCCAAGTGGAAGGCGGAGAAGGAGAAGCTGGGCGCCGCGACCACGCTGAAGTCGAAGCTC
GACCAGGCGCGGGCGGATCTGGCCACCGCGCAGCGGCAGGGCGAATACCAGAAGGCCGGCGAGCTGACCTATTCGGTCAT
CCCCGAGCTTGAGAAGAAGCTCGCCGAGGTCGAGAAGGCGGGCGCAGCCGGGCAGATGGTGGAAGAGGCGGTGACGCCGA
ACCACATCGCCGGCGTCGTCTCGCGCTGGACCGGCGTGCCGGTGGACAAGATGCTGGAAGGCGAGCGCGAGAAGCTCTTG
CGCATGGAGCTGGAGCTGGCCAAGCGCGTGGTGGGCCAGTCGGAGGCGGTGGCCGCCGTCTCCACTGCCGTGCGTCGCGC
CCGCGCCGGCCTCCAGGACCCGAACCGGCCCATCGGCTCGTTCCTGTTCCTCGGCCCCACCGGCGTCGGCAAGACCGAGC
TGACCAAGGCGCTCGCCGAATTCCTGTTCGACGACGAGACCGCCATGGTCCGCATCGACATGTCGGAATACATGGAGAAG
CACTCCGTGAGCCGCCTCATCGGCGCGCCTCCCGGCTATGTGGGCTATGACGAGGGCGGTGCCCTCACCGAGGCGGTCCG
CCGCCGGCCCTACCAGGTGGTGCTGTTCGACGAGGTGGAGAAGGCCCATCCGGACGTGTTCAATGTCCTCCTGCAGGTGC
TCGACGACGGGCGCCTCACGGACGGGCAGGGGCGCACGGTGGACTTCCGCAATGTGCTTATCGTCATGACCTCCAACCTC
GGCGCCGAATTCCTCGCCGACCCGCGCCAGCCCATGGGCTTCAAGGTGCCGGGCCACGAGGGAGAGACCGTGGTGTCGGA
CGAGGAGGCCTACGATATGGTGATGGGGGCGGTGCGGCGTCATTTCCGCCCCGAATTCATCAACCGCATCGACGAGATCG
TCATGTTCCACCGCCTGAAGCGGGAGCAGATGGACTCCATCGTGGACATCCAGATGGGCCGGCTGCGCAAGCTGCTGGAG
GATCGCAAGATCACCATCGAGCTGTCCCCCGAGGCGCGGGCCTTCCTCGCCGAGAAGGGTTACGACCCGGCCTATGGCGC
GCGTCCCCTGAAGCGCACCATCCAGAAGCTGGTGCAGGACCCGCTGGCCGAGAAGATCCTCGCCGGCACCGTCCTGGACG
GCGCAACGGTGAAGGTGGGCCTGGACAACGGCCAGCTTACCTTCGCGGGAGAGGCGGCGCCGGTGGACCAGGCCGCCTGA

Protein sequence :
MNFEIYTERARGFVQSAQSLATREGNQQFTPEHLLKVLMDDPEGLCSGLIQRAGGNLVLVRAEVEAALKKLPKVEGGSGQ
VYLSQQLAKVFETAEQAAKKAGDGYVTVERMLLALTIEKDTEAGRILVKAGVTPQTLNAAIEALRKGRTADSATAENAYD
ALKKYARDLTQAVRDGKLDPVIGRDEEIRRTIQVLARRTKNNPVLIGEPGVGKTAIVEGLARRIVDGDVPESLKNKSLLA
LDMGSLIAGAKYRGEFEERLKSVLSEVESAEGGIILFIDEMHTLVGAGKTDGAMDASNLLKPALARGELHCVGATTLDEY
RKHVEKDAALARRFQPVFVSEPTVEDTVSILRGLKEKYELHHGVRITDSALVSAAVLSNRYITDRFLPDKAIDLMDEAAS
RLRMQVDSKPEELDSLDREIMRRKIEQEALKKETDTASKDRLKRSEKELADLEEKASVLTSKWKAEKEKLGAATTLKSKL
DQARADLATAQRQGEYQKAGELTYSVIPELEKKLAEVEKAGAAGQMVEEAVTPNHIAGVVSRWTGVPVDKMLEGEREKLL
RMELELAKRVVGQSEAVAAVSTAVRRARAGLQDPNRPIGSFLFLGPTGVGKTELTKALAEFLFDDETAMVRIDMSEYMEK
HSVSRLIGAPPGYVGYDEGGALTEAVRRRPYQVVLFDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNVLIVMTSNL
GAEFLADPRQPMGFKVPGHEGETVVSDEEAYDMVMGAVRRHFRPEFINRIDEIVMFHRLKREQMDSIVDIQMGRLRKLLE
DRKITIELSPEARAFLAEKGYDPAYGARPLKRTIQKLVQDPLAEKILAGTVLDGATVKVGLDNGQLTFAGEAAPVDQAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 2e-167 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Xaut_1902 YP_001416804.1 ATPase VFG0079 Protein 4e-171 48
Xaut_1902 YP_001416804.1 ATPase VFG2084 Protein 4e-104 42
Xaut_1902 YP_001416804.1 ATPase VFG2076 Protein 2e-110 41