Gene Information

Name : Xaut_1280 (Xaut_1280)
Accession : YP_001416186.1
Strain : Xanthobacter autotrophicus Py2
Genome accession: NC_009720
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1473484 - 1474161 bp
Length : 678 bp
Strand : +
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mag:amb3243 response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

DNA sequence : 
ATGCGTATATTGCTTGTCGAAGACAACGAACGGATGTCGGCGCTGGCCGCCGATGCGCTGCGCACGGCGGGCTTCGCCGT
CGATGCCGTCCATGCGGCGGCTGACGCTGAGGAAGCGGTCTCAACCACCCCGTTCGACGCCATAATCCTCGATCTCGGCC
TGCCGGACCGCGACGGCATGGACCTTCTGGACACGCTGCGGCGCAAGGGTGTGGCCCAGCCCATCCTGGTGCTGACCGCC
CGCGACGGCGCGCCCTCGGTCATCGCCGGGCTCAATGGCGGCGCCGACGACTATATGCGCAAGCCCTTCAACGTGGACGA
ACTGATCGCCCGCGTCCGCGCCCTGCTGCGGCGTCCCGGCTCGGCGCTGGGGGTGTCGCTGAAGGAAGGCAATGTGGAGC
TGGACACCATCGCCCGGCAGGCGCGGGTGGATGGGGTGGGGCTCGATCTCAGCCGCAAGGAGGCGGCGGCGCTGGAGCTT
TTGATGCGCCGCACCGGCGCGGTCATCTCCAAGCCGGCGCTGGAGGAGACCCTCTACGGCTATGGTGAGGAGGTCAGCTC
AAACGCCGTGGAAGTGCTGATCCACCGCCTGCGCAAGAAGCTGGCGGGGGCCGGCGCGGTGGTGGAGATCCACACTCTGC
GCGGCATCGGCTACCTCCTGTCCGGGGCGCGGCCGTGA

Protein sequence : 
MRILLVEDNERMSALAADALRTAGFAVDAVHAAADAEEAVSTTPFDAIILDLGLPDRDGMDLLDTLRRKGVAQPILVLTA
RDGAPSVIAGLNGGADDYMRKPFNVDELIARVRALLRRPGSALGVSLKEGNVELDTIARQARVDGVGLDLSRKEAAALEL
LMRRTGAVISKPALEETLYGYGEEVSSNAVEVLIHRLRKKLAGAGAVVEIHTLRGIGYLLSGARP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 2e-32 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Xaut_1280 YP_001416186.1 two component transcriptional regulator NC_002516.2.879194.p Protein 2e-29 44
Xaut_1280 YP_001416186.1 two component transcriptional regulator BAC0083 Protein 5e-31 42
Xaut_1280 YP_001416186.1 two component transcriptional regulator CP000647.1.gene1136. Protein 5e-25 41
Xaut_1280 YP_001416186.1 two component transcriptional regulator BAC0530 Protein 5e-25 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Xaut_1280 YP_001416186.1 two component transcriptional regulator VFG0473 Protein 4e-32 42