Gene Information

Name : Xaut_1207 (Xaut_1207)
Accession : YP_001416113.1
Strain : Xanthobacter autotrophicus Py2
Genome accession: NC_009720
Putative virulence/resistance : Virulence
Product : periplasmic solute binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0803
EC number : -
Position : 1387878 - 1388852 bp
Length : 975 bp
Strand : -
Note : PFAM: periplasmic solute binding protein; KEGG: sme:SMc02509 putative iron-binding periplasmic ABC transporter protein

DNA sequence : 
ATGCGCTGCCGTAGCTGTTTGACGGCCGGTTCTACGGCCCCTTCTTTGGTGCGTTCCTGGGCTGGCCGCGTCTTTTCGGC
GGCCGGCGCCGTGCTTCTCGCGGCGCTGGTGGCAACCTCGTCCACTGCCCCGGCCCGGGCAGCCGACAAGCTGAAGGTGG
TCACCACCTTCACCATCATCGCCGACATGGCGAAGAACGTGGCCGGCGATGCCGCGCAGGTGGACAGCATCACCAAGCCC
GGCGCCGAGATCCACAATTACCAGCCCACCCCCGGCGACCTCATCAAGGCTCAGGGCGCCAACCTCATCCTGTGGAACGG
CCTGAACCTCGAACTGTGGTTCGAGAAGTTCTTCAGCCGCCTGAAGGGCGTGCCGAGCGTGGTGGTGTCCGACGGCGTCG
AGCCCATGGGCATCACGGAGGGCCCCTACAGCGGCAAGCCCAATCCCCACGCCTGGATGTCGCCCACCGCCGCCCTCGTC
TACGTGGACAACATCCGCGACGCGCTGGTGAAATACGATCCCGCCAACGCCACCACCTACAAGGCCAATGCCGAGGCCTA
CAAGGCCAAGATCACCGCCACCATCGCCCCCATCCGCGCCGAGCTGGACAAGGTGCCGGCAGACCAGCGCTGGCTGGTCA
CCAGCGAGGGCGCCTTCAGCTACCTGGCGCGGGATTTCGGCCTGAAGCCGCTCTATCTGTGGCCCATCAACGCCGACCAG
CAGGGCACGCCCCAGCAGGTGCGCCGGGTGGTGGACCGCATGCGAGCGGACAAGATCCCCGCCATCTTCTCCGAGAGCAC
CATTTCCGCCGAGCCCGCCAAGCAGGTGGCGCGGGAGACCGGCGCCCGCTACGGCGGCGTGCTCTATGTGGATTCGCTGA
GCGACGCCGCAGGCCCGGTGCCCACCTATCTCGACCTGCTGCGGGTGACCTCCACCACCATCGCCGAAGGCCTCACCGGA
GGCACCGCCCGATGA

Protein sequence : 
MRCRSCLTAGSTAPSLVRSWAGRVFSAAGAVLLAALVATSSTAPARAADKLKVVTTFTIIADMAKNVAGDAAQVDSITKP
GAEIHNYQPTPGDLIKAQGANLILWNGLNLELWFEKFFSRLKGVPSVVVSDGVEPMGITEGPYSGKPNPHAWMSPTAALV
YVDNIRDALVKYDPANATTYKANAEAYKAKITATIAPIRAELDKVPADQRWLVTSEGAFSYLARDFGLKPLYLWPINADQ
QGTPQQVRRVVDRMRADKIPAIFSESTISAEPAKQVARETGARYGGVLYVDSLSDAAGPVPTYLDLLRVTSTTIAEGLTG
GTAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitA YP_217781.1 iron transporter: fur regulated Virulence SPI-1 Protein 7e-101 75
sitA NP_457255.1 Iron transport protein, periplasmic-binding protein Virulence SPI-1 Protein 7e-101 75
sitA NP_806464.1 iron transporter periplasmic-binding protein Virulence SPI-1 Protein 7e-101 75
sitA NP_461782.1 periplasmic binding protein Virulence SPI-1 Protein 7e-101 75
sitA AAD41065.1 SitA Virulence centisome 63 pathogenicity island Protein 5e-101 75

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Xaut_1207 YP_001416113.1 periplasmic solute binding protein BAC0349 Protein 3e-101 75
Xaut_1207 YP_001416113.1 periplasmic solute binding protein BAC0439 Protein 2e-92 68

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Xaut_1207 YP_001416113.1 periplasmic solute binding protein VFG0525 Protein 3e-101 75