Gene Information

Name : Xaut_1206 (Xaut_1206)
Accession : YP_001416112.1
Strain : Xanthobacter autotrophicus Py2
Genome accession: NC_009720
Putative virulence/resistance : Virulence
Product : ABC transporter-like protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : -
Position : 1386982 - 1387881 bp
Length : 900 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rle:RL3885 putative Fur regulated salmonella iron ABC transporter

DNA sequence : 
ATGAATGCCCCGCTTCCTCCCCTCACCCAGGCGGATGCCGCCGGCGCCGGCCTTTGCGTCGCCCACGTCACCGTCACCTA
TCGCAACGGCCACACCGCCCTGCGCGACGCCAGCTTCGAGATCCCCACCGGCACCATCACCGCGCTGGTGGGGGTGAACG
GCTCGGGCAAGTCCACCCTGTTCAAGACCATCATGGGCTTCCTCTCGGCGGCGAAGGGGTCCGTCACCATCCTCGGCATG
AGCGTGCGCGAGGCATTAAAGCGCAACGTGGTGGCCTATGTGCCCCAGGCCGAGGAGGTGGACTGGACCTTCCCCGTGCT
GGTGGAAGACGTGGTGATGATGGGCCGCTACGGCCACATGAATTTCCTGCGCATGCCCCGCCGCGCCGACCACGAAGCGG
TGACGGCGGCGCTCGGCCGCGTCAACATGCTGGAATTCCGCAAGCGCCAGATCGGCGAGCTCTCCGGCGGGCAGAGGAAG
CGCGTGTTCCTCGCCCGCGCGCTGGCGCAGGACGCCCGCGTGATCCTGCTCGACGAGCCCTTCACCGGCGTGGACGTGAA
GACCGAGGACGCCATCATCGCCCTGTTGAAGGCGCTGCGCGACGAGGGCCGGGTGATGCTTGTCTCCACCCACAATCTCG
GCTCGGTGCCGGAATTCTGCGACCGCACGGTGCTCATCAAGGGCACGGTGCTGGCCTATGGGCTGACCTCCGAGATCTTC
ACGCAGGTGAACCTCGAGAAGGCCTTCGGCGGCGTGCTGCGCCATTTCGTGCTGGACGAGAGCCACTCCACCGCCGCCGG
CACGCTGGGCGTGCTGACCGACGACGAGCGCCCCCTCGTGCTCTACAAGGACCGCCCCGCCGCCAGCGGCACCGCCGGCT
CCTCGGAGGGGATCGGGTAA

Protein sequence : 
MNAPLPPLTQADAAGAGLCVAHVTVTYRNGHTALRDASFEIPTGTITALVGVNGSGKSTLFKTIMGFLSAAKGSVTILGM
SVREALKRNVVAYVPQAEEVDWTFPVLVEDVVMMGRYGHMNFLRMPRRADHEAVTAALGRVNMLEFRKRQIGELSGGQRK
RVFLARALAQDARVILLDEPFTGVDVKTEDAIIALLKALRDEGRVMLVSTHNLGSVPEFCDRTVLIKGTVLAYGLTSEIF
TQVNLEKAFGGVLRHFVLDESHSTAAGTLGVLTDDERPLVLYKDRPAASGTAGSSEGIG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 5e-88 68
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 3e-88 68
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 4e-88 68
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 7e-88 68
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 7e-88 68

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Xaut_1206 YP_001416112.1 ABC transporter-like protein BAC0350 Protein 2e-88 68
Xaut_1206 YP_001416112.1 ABC transporter-like protein BAC0440 Protein 7e-82 61
Xaut_1206 YP_001416112.1 ABC transporter-like protein BAC0400 Protein 3e-46 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Xaut_1206 YP_001416112.1 ABC transporter-like protein VFG0526 Protein 2e-88 68