Gene Information

Name : Xaut_1205 (Xaut_1205)
Accession : YP_001416111.1
Strain : Xanthobacter autotrophicus Py2
Genome accession: NC_009720
Putative virulence/resistance : Virulence
Product : ABC-3 protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1108
EC number : -
Position : 1385885 - 1386769 bp
Length : 885 bp
Strand : -
Note : PFAM: transport system permease protein; ABC-3 protein; KEGG: sme:SMc02507 putative iron transport system membrane ABC transporter protein

DNA sequence :
ATGGCCGCCTCCCTGTCTCCGATCCTCGCCCTCCTCATCGAGCCCTTCGGCTATTCCTACATGGTCAACGCCATGTGGGT
GAGCGCGCTGGTGGGGGCGGTGTGCGCGTTCCTGTCCGCCTTCCTCATGCTGAAGGGCTGGTCGCTCATCGGCGATGCCC
TGTCCCATGCCATCGTGCCGGGGGTGGCGGGGGCCTACATGCTGGGCCTGCCGTTCTCGCTGGGCGCCTTCTTCTCCGGC
GCGCTGGCGGCGGGCGCCATGCTGTTTTTGCAGGAGCGCACCAAGCTGAAGGAAGATGCCGTCATCGGCCTCATCTTCAC
CTCCTTCTTCGGCCTCGGCCTGTTCATGGTCTCCCTGTCGCCGACTTCAGTAAACGTGCAGACCATCGTGCTCGGCAACA
TCCTCGCCGTCTCGCCGTCCGACACGCTGCAGCTGGCGCTCATCGGCTTCGTCTCGCTGGCGCTGCTGCTGGTGTTCTGG
AAGGACCTGATGGTGACCTTCTTCGACGAGAGCCACGCCCGCTCCATCGGCCTCAACCCCACCTTCCTGAAGATCATGTT
CTTCACGCTTCTCTCCGCCTGCACGGTGGCGGCGCTGCAGACGGTGGGGGCCTTCCTCGTCATCGCCATGGTGGTGACGC
CGGGGGCCACCGCTTACCTGCTCACCGACCGCTTCCCTCGCCTCATCGCCTTGTCTGTCGCCATCGGCGCGGGCACGAGC
TTCGTCGGCGCCTATCTCTCCTATTTCGTGGATGGGGCGACAGGCGGCATCATCGTCGTGCTCCAGACCCTCATCTTCCT
CACCGCCTTCGTGTTCGCACCCAAGCACGGGCTTTTGGCGGCGCGGCGGCAGGCGGCGCTGGCCTTGAGGGAGGGCGGGC
TGTGA

Protein sequence :
MAASLSPILALLIEPFGYSYMVNAMWVSALVGAVCAFLSAFLMLKGWSLIGDALSHAIVPGVAGAYMLGLPFSLGAFFSG
ALAAGAMLFLQERTKLKEDAVIGLIFTSFFGLGLFMVSLSPTSVNVQTIVLGNILAVSPSDTLQLALIGFVSLALLLVFW
KDLMVTFFDESHARSIGLNPTFLKIMFFTLLSACTVAALQTVGAFLVIAMVVTPGATAYLLTDRFPRLIALSVAIGAGTS
FVGAYLSYFVDGATGGIIVVLQTLIFLTAFVFAPKHGLLAARRQAALALREGGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitC AAD41067.1 SitC Virulence centisome 63 pathogenicity island Protein 5e-84 77
sitC YP_217783.1 iron transporter: fur regulated Virulence SPI-1 Protein 7e-84 77
sitC NP_461784.1 permease Virulence SPI-1 Protein 7e-84 77
sitC NP_457257.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 7e-84 77
sitC NP_806466.1 iron transporter inner membrane protein Virulence SPI-1 Protein 7e-84 77
sitD AAD41068.1 SitD Virulence centisome 63 pathogenicity island Protein 1e-42 42
sitD NP_461785.1 permease Virulence SPI-1 Protein 2e-42 42
sitD NP_457258.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 3e-42 41
sitD NP_806467.1 iron transporter inner membrane protein Virulence SPI-1 Protein 3e-42 41
sitD YP_217784.1 iron transporter: fur regulated Virulence SPI-1 Protein 3e-42 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Xaut_1205 YP_001416111.1 ABC-3 protein BAC0351 Protein 3e-84 77
Xaut_1205 YP_001416111.1 ABC-3 protein BAC0441 Protein 1e-74 70
Xaut_1205 YP_001416111.1 ABC-3 protein BAC0352 Protein 8e-43 42
Xaut_1205 YP_001416111.1 ABC-3 protein BAC0442 Protein 4e-37 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Xaut_1205 YP_001416111.1 ABC-3 protein VFG0527 Protein 3e-84 77
Xaut_1205 YP_001416111.1 ABC-3 protein VFG0528 Protein 8e-43 42