Gene Information

Name : Xaut_1075 (Xaut_1075)
Accession : YP_001415982.1
Strain : Xanthobacter autotrophicus Py2
Genome accession: NC_009720
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1234238 - 1234900 bp
Length : 663 bp
Strand : +
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rpc:RPC_4906 two component transcriptional regulator, winged helix family

DNA sequence : 
ATGCGCATACTGGTCGTCGAGGACGATCCGGTCCTGATGGACGGGCTCAAGGTGGGGCTCGGCCTCGCGGGAGCAACGGT
GGATGAGGCGACGACCTGCGCCGATGCGCGGGCGGCGCTCGCGGCCGGCCGGTTCGATGCGGTGGTGCTCGACGTGATGC
TCCCGGATGGCTCCGGCCTCGACGTGCTCGCCGGCCTGCGCGCGCGGGGCAACGCAACGCCCGTCCTCCTGCTCACCGCC
CTCGACGAGGCGCCGGACCGGGTGCGGGGCCTCGACGGCGGCGCTGACGACTATCTGGGCAAGCCCTTCGACCTCGACGA
ACTGAACGCCCGCGTGCGCGCCATCGCCCGCCGCGGCCATGGCCGGGCCGGCCCGCTGCTCAAGGCGGGCGCGCTGGTGC
TCGATCCCGCCACCCTCGCTGCGACGCTGGATGGGCTGCCCATCGCCCTGTCGCGTCGGGAGTTCGCGGTGCTCTCCGCG
CTCATGGAGCGGCCGGGCGTGATCCGCTCCCGGATGGAGATCGAGGAGCGGCTCTACGGCTGGCAGGAGGAGGTGGAGAG
CAACGCGGTGGAGGTGCACATCCACAATCTTCGGGCCAAGGTCGGCCGCGAGACCATCGAGACCGTGCGCGGCCTCGGCT
ATCGCGTCAGGGGGCCGGCATGA

Protein sequence : 
MRILVVEDDPVLMDGLKVGLGLAGATVDEATTCADARAALAAGRFDAVVLDVMLPDGSGLDVLAGLRARGNATPVLLLTA
LDEAPDRVRGLDGGADDYLGKPFDLDELNARVRAIARRGHGRAGPLLKAGALVLDPATLAATLDGLPIALSRREFAVLSA
LMERPGVIRSRMEIEERLYGWQEEVESNAVEVHIHNLRAKVGRETIETVRGLGYRVRGPA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 5e-29 49

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Xaut_1075 YP_001415982.1 two component transcriptional regulator BAC0487 Protein 4e-28 44
Xaut_1075 YP_001415982.1 two component transcriptional regulator BAC0197 Protein 7e-22 43
Xaut_1075 YP_001415982.1 two component transcriptional regulator BAC0288 Protein 5e-18 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Xaut_1075 YP_001415982.1 two component transcriptional regulator VFG0473 Protein 9e-31 44
Xaut_1075 YP_001415982.1 two component transcriptional regulator VFG1390 Protein 1e-22 41