Gene Information

Name : Xaut_1064 (Xaut_1064)
Accession : YP_001415971.1
Strain : Xanthobacter autotrophicus Py2
Genome accession: NC_009720
Putative virulence/resistance : Unknown
Product : integrase catalytic subunit
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 1219283 - 1220155 bp
Length : 873 bp
Strand : -
Note : PFAM: Integrase catalytic region; KEGG: rpa:RPA3836 integrase, catalytic domain

DNA sequence :
ATGAGCGAACGGCGGGCGTGTAAAGCCACCGGCTTCTGCCGCATGACCATGAGATACAGAGCCACGCGCGGGAATGACGC
CTCGCTGCGTGAGCGCATGAAGGCCATCGCCCAGGAGCGACGGCGGTTTGGCTACCGCCGTCTCCACGTCCTGCTCAGGC
GGGAGGGCTTCCGGGTCAACCACAAGCGGCTGTTCCGGCTCTACCGTGAGGAACGGCTGATGGTCCGCCGGCGAGGCGGT
CGCAAGCGGGCGATCGGGACACGGGCGCCGATGATGATCCCGATGGGACCGAACGAGCGCTGGTCACTCGACTTCGTCGC
CGACCAGATGACCGATGGCCGCCGCTTCCGGATGCTGGCCATCGTGGACGACTGCACCCGCGAGTGCCTGGCGCTGGTGG
CGGACACCTCGCTGTCCGGGGTCAGGGTCGCTCGCGAACTCGACAGGCTTCTGGCAGAGCGCGGCCGGCCCAAGATGATC
GTCAGCGACAATGGCAGCGAGTTCACCTCCAATGCCATTCTGGCCTGGACCGACGCGGCCCGGGTCGAGTGGCACTACAC
CGCGCCCGGCAAGCCGATGCAGAATGGCTTCATCGAGAGCTTCAACGGCCGCCTTCGGGACGAGCTGTTGAACGAGACGC
TGTTCTCCAGCCTGTCCCAGGCCAGGGCCGCCCTCGCCCGATGGCAGGTCGATTACAACACCGACCGACCGCACTCGAAG
CTCGAATGGCAGACGCCAAGCGCCTTCGCCTCAACGTTCCACCCGCGGCGGGATCAGACGCTCCACAACATGAGCGGCTC
CGCGTCTGCCCCCGCCGCCCCGCACACCCGAAAGGGCAAATCCAACCGCCAGAACGAACTCAAAGCTGGATAG

Protein sequence :
MSERRACKATGFCRMTMRYRATRGNDASLRERMKAIAQERRRFGYRRLHVLLRREGFRVNHKRLFRLYREERLMVRRRGG
RKRAIGTRAPMMIPMGPNERWSLDFVADQMTDGRRFRMLAIVDDCTRECLALVADTSLSGVRVARELDRLLAERGRPKMI
VSDNGSEFTSNAILAWTDAARVEWHYTAPGKPMQNGFIESFNGRLRDELLNETLFSSLSQARAALARWQVDYNTDRPHSK
LEWQTPSAFASTFHPRRDQTLHNMSGSASAPAAPHTRKGKSNRQNELKAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13540.1 insertion sequence IS407 OrfB Not tested PAGI-8 Protein 4e-43 45
unnamed ABR13352.1 insertion sequence IS407 OrfB Not tested PAGI-5 Protein 7e-27 44
XCV0439 YP_362170.1 ISRSO12 transposase (fragment) Not tested Hrp PAI Protein 6e-34 42