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Name : Plav_3466 (Plav_3466) Accession : YP_001414722.1 Strain : Parvibaculum lavamentivorans DS-1 Genome accession: NC_009719 Putative virulence/resistance : Unknown Product : integrase family protein Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0582 EC number : - Position : 3709966 - 3711900 bp Length : 1935 bp Strand : - Note : PFAM: integrase family protein; KEGG: har:HEAR2054 integrase DNA sequence : ATGATGGCACTCTCTGATCTGACTGTGCGGCAAGCCAAGGCCGCTGACAAAACCTACAGCCTCCCCGATACCGATGGCCT CGGCCTGGTGGTCGCCCCTACCGGCGGCAAATCGTGGCACCTGCGCTACTACTGGCTCGGCAAGCAAAAGCGCATCTCCC TGGGCAACTACCCCGAGATCGGCCTGCGTGAAGCGCGTACCTTGCGCGACGAAGCCCGCGCACTCTTGGCTAGGGGCATC AACCCTCACACCGACCGCAAGCAGAAACGCCATGCCGTGAAGCTGGCGGCCGACTACACGTTCAAGGCGGTCTTCGATGC CTGGGTCGAGCATCGGCGCAAGGAACTCAAGGAAGGCCGTCAAAGCACCCTCTCGCAGATCCTGCGGATTTTCGGCAAGG ACGTGCTGCCCGCCCTCGGGAAGATGTCGATCTACGACATTCGCCGGCCCCAGCTTCTGGGCGTCCTGGCAAGAATCGAG GAACGCAAGGCTTTCACCACGGCAGAAAAGGTCCGCACCTGGTTGAGCCAGTTGTTCCGCTATGCCCTCGTGATCGTCGA GGGGCTGGAGGCCAATCCGGCTTCTGACCTGGATGTGGTGGCGGAGCCCAAGCCTCCGGTGAACCACAACCCGTACTTGC ATTTGCCCGAGCTGCCGGAATTCCTTCAGAAGCTCCGGCTCTACAACCCGCGTGGCTGGCAGACCCAGCTCGGCATCCGG CTGCTGTTCCTGACCGGGGTGCGAACCGGCGAGCTGCGGCTGGCGACCCCGGATCAGTTCGACCTGGACCGCGGCCTCTG GATCATTCCGCCCCAGATCGTCAAGCAGCTTCAGGATGAGATGCGCAAGGCCGGCAAGCGCCCCCAGGATGTGCCGCCCT ACATCGTACCGCTGTCCCTTCAAGCCATCGAGATCGTGAGCTACCTTCTGGGGGTGATACGGCCGGCCCAGCGCCACCTG CTGGCGCACCGCAGCGAACTCAAGAAGCGCATCAGCGAGAACACCCTCAATGCCGCCTTGAAGCGGATGGGCTACGAGGA CCAACTGACCGGCCACGGCATCCGGGGAACGATTTCGACGGCGCTCAACGAGATCGGCTACCCCAAGATTTGGGTGGACG CGCAGCTCTCGCACTCCGACCCGAACAAGGTGAGTTCGGCTTACAACCATGCCAAGTACGTTGAGCCGCGCCGCCGGATG ATGCAGGACTGGGCGGATCGCCTCGACCTGCTCGAACAGGGCCAGGTGGAGGCGGCCAGCGCGCACCTCACCATTCACAT CGAGGGCGTGCCGGCCATGGCAGAGGAGGACAAGCCCGACGCCATCGTTGCAGCGTCCTCTGCGGCACCCGTTCCGTCGA TGGTGACCGCTCCCATCGTCGTGACGCCGAACGACGGGAGCATCACGTTCCAGCGGCTGTCGCAGGTGCCGCCGCCTCCG ACGCATGCGCCAGAACCGGAAGTATCTGCCATCCAGCGCGAGCGCGAGGAAATGCTGGCCATCTATGAATCGCCGAGCAG CCTGCCGGTCCCCCTGTTCGGCAAGTTGGCCGGGAAGTCCAAAGACCAGATCAACCGCGAGTTGAAGGCCGGCAAACTGC TATCCGTCAGCTTGGGCAACCGGGGCCAGCGAGTTCCCGATTGGCAACTGGTGCCGCTCAAGCACAAGCTGGCCCAGGTG CTCATGCGCCAGTGTCCGCAAGCGGATTCGTGGGAGCTTTACCGCATGCTGACCCGGCCACACCCGGACCTGGGCGATCG CGCGGCCATCGATTTGGTGACGCCAAGCAATCTGGGCATGGTGGTCCAGGTCATCGCAAGCGGCCAGTTCCATGCGAATG CGCCAGAGACAGTCCCACCGCGGCCTATCCCAGAGGAGGTGCGGCAGAGCGTTCGCCGAATGGTGGACAGCGCCGTGGTT CTGGACGGCGCATAG Protein sequence : MMALSDLTVRQAKAADKTYSLPDTDGLGLVVAPTGGKSWHLRYYWLGKQKRISLGNYPEIGLREARTLRDEARALLARGI NPHTDRKQKRHAVKLAADYTFKAVFDAWVEHRRKELKEGRQSTLSQILRIFGKDVLPALGKMSIYDIRRPQLLGVLARIE ERKAFTTAEKVRTWLSQLFRYALVIVEGLEANPASDLDVVAEPKPPVNHNPYLHLPELPEFLQKLRLYNPRGWQTQLGIR LLFLTGVRTGELRLATPDQFDLDRGLWIIPPQIVKQLQDEMRKAGKRPQDVPPYIVPLSLQAIEIVSYLLGVIRPAQRHL LAHRSELKKRISENTLNAALKRMGYEDQLTGHGIRGTISTALNEIGYPKIWVDAQLSHSDPNKVSSAYNHAKYVEPRRRM MQDWADRLDLLEQGQVEAASAHLTIHIEGVPAMAEEDKPDAIVAASSAAPVPSMVTAPIVVTPNDGSITFQRLSQVPPPP THAPEPEVSAIQREREEMLAIYESPSSLPVPLFGKLAGKSKDQINRELKAGKLLSVSLGNRGQRVPDWQLVPLKHKLAQV LMRQCPQADSWELYRMLTRPHPDLGDRAAIDLVTPSNLGMVVQVIASGQFHANAPETVPPRPIPEEVRQSVRRMVDSAVV LDGA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| int | AAN62094.1 | putative integrase | Not tested | PAGI-2(C) | Protein | 0.0 | 94 |
| unnamed | AFG30104.1 | Int | Not tested | PAGI-2 | Protein | 0.0 | 83 |
