Gene Information

Name : Plav_3462 (Plav_3462)
Accession : YP_001414719.1
Strain : Parvibaculum lavamentivorans DS-1
Genome accession: NC_009719
Putative virulence/resistance : Unknown
Product : LysR family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG0583
EC number : -
Position : 3706818 - 3707708 bp
Length : 891 bp
Strand : +
Note : PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rme:Rmet_2400 transcriptional regulator, LysR family

DNA sequence : 
ATGGAACTGCGACACCTGCGTTGCTTTATCGTTTTGGCCGAAGAGCTTCATTTCACACGGGCCGCCGAGCGCCTGCATAT
CGAGCAACCCCCTTTATCTCGCGCCATCAAAGAGCTTGAAGACGAACTGGGGGTGGTACTTTTCGACCGAAATCGCCGTG
GAACCGTTCTGACCGCAGCAGGTGCTGCCTTCTTGCAGGATATTCGACGCCTGCTCACCGTCCTGGAGCAGGCACGAGAA
AACGCCAAGGCTGTCGCCTCAGGCTTGCGAGGCAGCTTGCGCATTGCAGTGTCCGATGGTGCGATCGATCCTCGACTGTC
AGCATTTCTGGTCCGCTGCCGCGCAGAGGAACCGGAGATAGAGATACGCCTATCCGAGGTGCCGTTGGCCGAGCAGCTAC
GCGGCTTGCGGTCAGGCGACTTCACGATCGGATTCGCGCACACGGCCGAAGTCGGTGACGACATTGTTGCCGAACCCATC
TGGCGGGATCCGTTGGTGATCGCCGTGCCAGCTCGGCACGCGCTGCTCGTCCACAAGAAGGTCCCACTTCATGAACTCCG
GGGGCATCCGCTTGTCTTGTGCGACCCTCACGCATGCGAGGGGTACTGCCGCGAATTGGGGCGGCTCTTGCAGGTGCTGG
AGCACAAGCTGAACATCGTCGAGGAAGTGTCTTCGCTGGACATGATGCTCACGCTGGTCGGTGCAGGATATGGCGTCGGC
TTCATGACGGCGACCAAGATTCCGGTCTGCCAATGGCCGGATGTGGTGATTCGTCCCTTGGCGATGGATTCCGCGGTGAT
CACCACCTACTTGCTTCGGCCTGAAAGCAACAGTTTGTCGGCTTCGCTGGAGCGGTTTATCGCTCGGTTACGCGACTCGT
CCGACGGTTGA

Protein sequence : 
MELRHLRCFIVLAEELHFTRAAERLHIEQPPLSRAIKELEDELGVVLFDRNRRGTVLTAAGAAFLQDIRRLLTVLEQARE
NAKAVASGLRGSLRIAVSDGAIDPRLSAFLVRCRAEEPEIEIRLSEVPLAEQLRGLRSGDFTIGFAHTAEVGDDIVAEPI
WRDPLVIAVPARHALLVHKKVPLHELRGHPLVLCDPHACEGYCRELGRLLQVLEHKLNIVEEVSSLDMMLTLVGAGYGVG
FMTATKIPVCQWPDVVIRPLAMDSAVITTYLLRPESNSLSASLERFIARLRDSSDG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
bphR AAN62138.1 putative transcriptional regulator Not tested PAGI-2(C) Protein 9e-125 89
bphR AAN62326.1 putative transcriptional regulator Not tested PAGI-3(SG) Protein 4e-52 41