Gene Information

Name : Plav_3435 (Plav_3435)
Accession : YP_001414695.1
Strain : Parvibaculum lavamentivorans DS-1
Genome accession: NC_009719
Putative virulence/resistance : Unknown
Product : relaxase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3670558 - 3672423 bp
Length : 1866 bp
Strand : +
Note : PFAM: protein of unknown function DUF1528; Relaxase; KEGG: xfa:XF1753 hypothetical protein

DNA sequence :
ATGCTCTCCTTGTTCCAGCGAAAAAGGGTCTCTGTCGCCCCCGCTCCGTCGCCAGCACCTGCCATCGATCTCCCGAAAGG
GCTGCTGCGGCCAGAAGCCGCCGCAGCGCTGCTGGCAACACCGCGCCGGCAGAAACTGCTGGAACACATCTGGCAGCGCA
CGTCGCTGTCGCGCAGGCAGTTCGCCACCCTATACCGCGCACCGCTGGAGCGCTACGCCGAGCTGGTCCAGCAGTTCCCC
GCCTCCGAAAACCACCACCATGCCTACCCGGGCGGCATGCTGGACCACGGCCTGGAGATCGTCGCCTATAGCCTCAAGCT
GCGACAGTCCCATCTGCTGCCCATCGGCGCCAGCCCTGAGAACCAGGCCGCGCAAGCCGAAGCCTGGACGGCCGCCGTCG
CCTATGCCGCTCTGCTGCACGACATCGGCAAGATCGCGGTCGATCTGCACGTCGAACTGGCCGACGGCAACACCTGGCAT
CCCTGGCACGGCCCGTTGCACCAGCCGTACCGCTTCCGCTACCGCGACGATCGCGAGTATCGCCTGCACAGTGCCGCGAC
AGGCTTGCTCTACCGCCAGCTGCTTGACCGCCAAGTCCTGGACTGGCTCAGTGGCTATCCGGCGCTATGGGCGCCGCTGC
TCTACGTCCTGGCTGGCCAGTACGAGCACGCCGGGATACTGGGCGAGCTTGTCGTGCAAGCCGACCGTGCCTCGGTAGCG
CAGGAGCTGGGCGGCGATCCGGCGCGCGCCATGGCCGCACCCAAGCATGCGCTGCAACGCAAGCTACTCGACGGGCTGCG
CTATCTGCTCAAGGAAGAGTTGAAACTGAACCAGCCCGAGGCCTCCGATGGCTGGCTCACCGAGGACGCGCTGTGGCTGG
TGAGCAAGACGGTCTCCGACAAGCTGCGTGCGCACCTGCTATCCCAGGGCATCGATGGCATCCCGGCGAACAACACGGCG
GTGTTCAATGTGCTGCAGGACCACGGTATGTTGCAGCCCACACCGGACGACAAGGCGGTCTGGCGGGCGACCGTGACCAG
CCCCAGCGGCTGGTCTCACTCGTTCACGCTGCTGCGCATCGCTCCTGCGCTGATCTGGGAATCTGGCCAGCGGCCGACAC
CGTTCGCTGGCACCGTGGTAATCGACGTAGCGCCTGCAGCCAAAGATACCGATGCTTTCGTACCCCCGGCCGCGATCGCG
ACAAAGCCAGCCGCCGAGGGTCAGGAGCCGAAGCGTTGGGAGGAAAGCGGCGACATCGCTGCCCAGGCTCCCCCGCCCGC
TTCCCCGGCCATGCCCGATGCCATGGAAGACATGTTAGCTATGGTAGGCATGGGCGATCCGCCCGACGTTTCTCACAATG
AGCAGGCCGATACAGCCAACACATCTGCCGCACGCTCCGAGGCTCCTATGCCGACTATGGCTGTGACCTCGCCAACGTCG
CCTGTATCCACGGCCATAGCTGCACCGCCACCCTTAAGCGCACGGCCATCCGGTGAGCATTTCATGGAGTGGCTGCGCCA
GGGTATCGCTTTACGCAAGCTCATCATCAATGATGCGAAGGCGCTCGTGCATACCGTGAGCGACACCGCGTATCTGGTCA
GCCCTGGCGTGTTCCAGCGGTACGCACAAGAACACCCACAAGTGGGCATGCTGGCAAAGCAGGAGAGCCAACAAGATTGG
CAATGGGTGCAAAAGCGCTTCGAGCGGGTGCAGTTGCATCGCAAGCATCCCAACGGCTTGAACATCTGGGCCAGCGAAGT
GACAGGTCCGCGAAAATCACGGCGCCTGCATGGCTACCTTTTGCAAGACCCCCATTTGTTGTTTACGGAGGTGCCTCCAA
ACAATCCGTATCTGTCGTTGATCTGA

Protein sequence :
MLSLFQRKRVSVAPAPSPAPAIDLPKGLLRPEAAAALLATPRRQKLLEHIWQRTSLSRRQFATLYRAPLERYAELVQQFP
ASENHHHAYPGGMLDHGLEIVAYSLKLRQSHLLPIGASPENQAAQAEAWTAAVAYAALLHDIGKIAVDLHVELADGNTWH
PWHGPLHQPYRFRYRDDREYRLHSAATGLLYRQLLDRQVLDWLSGYPALWAPLLYVLAGQYEHAGILGELVVQADRASVA
QELGGDPARAMAAPKHALQRKLLDGLRYLLKEELKLNQPEASDGWLTEDALWLVSKTVSDKLRAHLLSQGIDGIPANNTA
VFNVLQDHGMLQPTPDDKAVWRATVTSPSGWSHSFTLLRIAPALIWESGQRPTPFAGTVVIDVAPAAKDTDAFVPPAAIA
TKPAAEGQEPKRWEESGDIAAQAPPPASPAMPDAMEDMLAMVGMGDPPDVSHNEQADTANTSAARSEAPMPTMAVTSPTS
PVSTAIAAPPPLSARPSGEHFMEWLRQGIALRKLIINDAKALVHTVSDTAYLVSPGVFQRYAQEHPQVGMLAKQESQQDW
QWVQKRFERVQLHRKHPNGLNIWASEVTGPRKSRRLHGYLLQDPHLLFTEVPPNNPYLSLI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C36 AAN62129.1 conserved hypothetical protein Not tested PAGI-2(C) Protein 0.0 78
ORF SG44 AAN62266.1 conserved hypothetical protein Not tested PAGI-3(SG) Protein 0.0 67
RL003 AAP84130.1 pathogenesis-related protein Not tested PAPI-1 Protein 1e-144 54
unnamed ABR13343.1 hypothetical protein Not tested PAGI-5 Protein 7e-146 53
EXA2 ABD94612.1 conserved hypothetical protein Not tested ExoU island A Protein 3e-144 53
pph99 CAI36140.1 predicted HD-superfamily hydrolase Not tested PPHGI-1 Protein 1e-122 50