Gene Information

Name : Plav_3428 (Plav_3428)
Accession : YP_001414688.1
Strain : Parvibaculum lavamentivorans DS-1
Genome accession: NC_009719
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3664841 - 3665788 bp
Length : 948 bp
Strand : +
Note : PFAM: protein of unknown function DUF1527; KEGG: bxe:Bxe_A1180 hypothetical protein

DNA sequence :
GTGACCCGCCCATTCGACCTGATGCGCCGCTTGCGTGCTGGCGTGGCATCCGTGCTGCTGCTCAGCGCCACGGGCAGCTA
TGCGCTCAACACCGCAACCATCGTCGGCTCGGTGGCATCGCCAGACTGCCTCGAATACCGCGTCGTCGGGATCTGCTACT
GGCTGTACTGCACCTGGACCGGCTGCACGGTGCGCACGTCGGTCAAAGTGCGCCACTACATCCCGGATGCGGTCGTCTCC
AGCTACAGCAATACCGGAGAAAACCCCTGGGCCGAGGTTCGGGCGATGAGCACGCCCAATCCTTCAGCTCAGGCCGGTGG
TGACGGCACCACCAACGAAGACCACGAGAACAACCTCGCCAAATTCAAGAACGCGGATGTCATCGGGCATCCCGGCGTCG
AGGTATTCAACCAGTTCGTCTCCTCATCGGGCTACTTCTGCGAGGGCGCGGGCACGGCGTTCATGCCGTATCTGCTCAGC
ACCTTGGACACGCTGGCCTGGCGCTACAACGTGCCCGAGATGGCCTACCCGGAGGCACTGATCCCCGGGACGCGCGAGAT
CGGCGTGCGCTCGACGTTGAACCTCTGGGGCAACGTGTATCCGCGCGGCGGCTTCCTGCATCAGACAGACGACCACAAGG
CTGGTGCCGTGGTGGCCCAGCGTGCGGGCGATGTCGTCACTCGCCGCGGGCAGTTGCACGTGTACCAGCCGCTGCTCGCC
AACGCCCGTGATGGCTACTGGCCGGCTGGCGAGCTGGTCGAAGGCGACGCCTCGACGGGCAAGTGGCAGGAACTCACACC
CGTCCTGTCATCGTCATGCTCGGTCTTCCCGCGCAACGGCTCCCTGACACAGGCCCAGCAAGGCGATTACGCGTGGGCGC
TGTGGCGGCCCTATGCGTGCTGTGAACGCCGTGGGCAGGTGTTTCTTGGCAGCGTTGATTTCCTCTGA

Protein sequence :
MTRPFDLMRRLRAGVASVLLLSATGSYALNTATIVGSVASPDCLEYRVVGICYWLYCTWTGCTVRTSVKVRHYIPDAVVS
SYSNTGENPWAEVRAMSTPNPSAQAGGDGTTNEDHENNLAKFKNADVIGHPGVEVFNQFVSSSGYFCEGAGTAFMPYLLS
TLDTLAWRYNVPEMAYPEALIPGTREIGVRSTLNLWGNVYPRGGFLHQTDDHKAGAVVAQRAGDVVTRRGQLHVYQPLLA
NARDGYWPAGELVEGDASTGKWQELTPVLSSSCSVFPRNGSLTQAQQGDYAWALWRPYACCERRGQVFLGSVDFL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C43 AAN62136.1 hypothetical protein Not tested PAGI-2(C) Protein 2e-133 90
ORF SG51 AAN62273.1 hypothetical protein Not tested PAGI-3(SG) Protein 3e-114 78
pph89 CAI36130.1 hypothetical protein Not tested PPHGI-1 Protein 3e-99 68
unnamed ABR13357.1 hypothetical protein Not tested PAGI-5 Protein 6e-94 67
EXA20 ABD94629.1 conserved hypothetical protein Not tested ExoU island A Protein 3e-95 66
RL017 AAP84144.1 conserved hypothetical protein Not tested PAPI-1 Protein 3e-92 66
STY4576 NP_458661.1 hypothetical protein Not tested SPI-7 Protein 1e-74 50
t4273 NP_807871.1 hypothetical protein Not tested SPI-7 Protein 1e-74 50
PMI2573 YP_002152292.1 hypothetical protein Not tested Not named Protein 1e-68 49
api54 CAF28528.1 conserved hypothetical protein Not tested YAPI Protein 3e-69 49
unnamed AAX39458.1 unknown Not tested Hrp PAI Protein 2e-57 48
YpsIP31758_3701 YP_001402655.1 hypothetical protein Not tested YAPI Protein 4e-69 48
Pmu_02990 YP_005176198.1 integrating conjugative element protein, PFL family Not tested ICEPmu1 Protein 3e-66 47
YE3467 YP_001007628.1 hypothetical protein Not tested YAPI Protein 3e-63 47